Transcript Information: R_Transcript_87135.p1


Annotated TAIR IDAT5G04240.1
Annotated Gene NameZinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein
Annotated Gene Symbol(s)ELF6
Annotation TypeOrtholog
Chromosome Positionchr5:1169544-1174638 | Forward length=1340
E-Value4.4E-299
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6665908635545
Replicate 22.8674052061064
Replicate 34.4274962965698
Condition 2: 8 Hour
Replicate 13.9104291781421
Replicate 24.9060442248571
Replicate 35.6351268791649
Condition 3: 24 Hour
Replicate 15.088409512409
Replicate 24.279378590709
Replicate 35.341253307922


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_87135.p1 GENE.R_Transcript_87135~~R_Transcript_87135.p1 ORF type:complete len:1340 (+),score=272.89,JmjC|PF02373.18|8.9e-37,JmjN|PF02375.13|1.1e-15,zf-H2C2_2|PF13465.2|3.4e+03,zf-H2C2_2|PF13465.2|0.031,zf-H2C2_2|PF13465.2|7.1e-05 R_Transcript_87135:382-4401(+)
ATGGACAATGTTGAAATACCCAATTGGCTGAAGGAGTTGCCCTTAGCACCAGTGTTTCGACCAACCGACACAGAGTTCGCCGACCCAATTGCTTATATTTCAAAGATTGAGAAAGAAGCTAGTGCTTTTGGAATATGTAAGGTGATTCCTCCATTACCCAAACCATCAAAAAGATATGTGTTCAACAATTTAAACAGTTCTCTCTCTAAATCTTTCCCACAGTGTTCGGATTTGAATTTTGTTGATGCTTCTTCTAGTAATTCCTTAAAGAGGGTTTCTGGGGGCAAGGTAAAGGTAAATGTAGATGATACTGAGGCTAAAGCTGTATTTACAACTAGGCAACAAGAATTGGGTCAAGCTTCAAAGAGAAGCAGGGTTTCCGTTAATAATGCCCAACAACCAGCTGCTCAGAAGCAAGTTTGGCAAAGTGGGGAGATATATACATTGGAGCAGTTTGAATCAAAGTCGAAAGCTTTTAGTAAGAGCGTATTAGGTAAAATTAAGGAAGTTACTCCTCAGGTTATAGAGGCATTGTTCTGGAAGGCTGCTTCAGAGAAGCCTATATATGTAGAATATGCTAATGATGTTCCAGGTTCTGGATTTGGTGAGCCAGAGGGCTTATTGTGTTATTTCCAAGCACAAAAGAGACGAAGAAGGAGACTATTTGGACAAAGGCATCAAGGGAAATCCTATTCTATGCAACAGGATGTGAAAACAGTGAATAATACCTCCAGTGGGGAAGTAATGGGCAAGAGCATATATCCAGTTCTAGAGCCACCTAAGGAATGTGCTAATGGACCACCTTCCTTGTTGAGTGCTGCAACTGAACAACCTACTCAGCTGGGGCCTAAATGTTCTAGTGGTGAAGTTGAAGGTACTGCTGGATGGAAGCTCTCTAACAGTCCTTGGAACCTACAAGTAATTGCGCGTTCTGCTGGCTCTCTTACTCGTTTTATGATGGAAGATATTCCTGGTGTTACATCCCCAATGGTTTACATTGGTATGTTGTTCAGTTGGTTTGCCTGGCATGTTGAAGATCATGAGCTTCATAGCTTGAATTTTCTTCACATGGGCGCACCAAAGACATGGTATGCCGTACCTGGAGGTCATGCATTTGCTTTAGAGGAAGTTATACGAAGACAGGCTTACGGAGGAGATATCGACCACTTAGCTGCACTAAAACTTCTTGGTGAGAAGACCACTCTTCTTTCACCCGAGTTATTAATTGCATCTGGCATTCCATGTTGCAGGTTGGTACAGAACCCTGGTGAATTTGTGGTGACATTTCCAAGGGCTTATCATGTAGGATTCAGTCATGGTTTCAACTGTGGAGAAGCTGCTAATTTTGGAACTCCTCAGTGGCTTACTATAGCAAAGGATGCTGCAGTGCGCAGGGCTGCTATGGACCATCTTCCCATGCTTTCCCATCAGCAGCTGCTATACTTATTGACCATGTCTTTTATTTCAAGGATCCCAAAATCTTTGCTTACTGGAGTACGTAGTTCTCGTTTGAGAGATCATCTGAAGAAAGAAAGAGAGCTCTTGGTTAAGAAGGCCTTTATTGATGATGTGCTGAAGGAAAATAATCTATTGGACACTATTTTACAGAAAAATTTGGCATGTCATGCTGTTTTATGGCACCCTGATTCACTACCATCTTTTACTAAAGAGTTCTTGTCTCCAAACCGAATTCCTCTGGATTCTGTTATCACTAATAAGGATGACCTGTCTGCAATTTCTGAGAAGAATGCTACTCAGGATGGGCTAGCTCACCAACTAACCTCATACATGGAAACTGTGAACGACTTTTATTTGGACACTGATGATCCTTTACATGACTTTCAAGTTGATTCTGGTACATTGCCATGTGCGGCTTGTGGAATTCTTGGGTATCCATTTATGTGCGTGGTTCAACCATCCAAGAAAGCATCGAAGGAGATTTTTCCTGCTGGGTGTTCTACAAAAATGAGGGAAGGTGAAATTATGCAAGAGCCAGAATCATGTTACCATCACCGGACAGATGCCATTTCAGCAACCAGTATTCAAAGATGCAATGGCTGTGGATTGAGACCGCGGATTTTCTGCTTGGAACATGCCATTAGAATTGAGGAGCTACTGAGACCAAAAGGTGGGGCAAGGATGCTTATAATTTGTCACTCAGATTTTCAAAAGATAAAGGTGAATGCTGCGGCTATTGCAGAAGAAATTGGGGCTACCTTCAATTACCAAGAGGTCGTACTTGAGTTTGCTTCTAAGGAAGAACTGAGTTTCATTGATCTTGCAGTTGATAGCGAGCAGCTCACTGATTGCACAGAAGACTGGACATCAAAGCTTGGAATGAACTTAAGCTATAGTGTCAAGGCCAGAACCAGTTGTCCCTCAAAGAATATAGAGCAGGCGCTAAACCTTGACTATTTGCTCTCTGTTATTGCTCCCAGTTCAGTGATTTCAGGAATCCAATGGTGTTCCAGGAAATCTCGTACCAAACGTGACTCAAGTTATGGAAAAATTTTGAATTTATACAATGATAACCACCTGAAGCAGGAAAAAATTTTTGACCAACCAGGTGGTAACATGGAAGTAAAAGAAAAAGTGCTTCTCCAATATTCACGGAAGAAATATAGGATCGAATCAAGAACTTATACTGGGCCAAAATTCATATCTGATTGTGGCATGAAGTTTTCACTGGAAGTGACAGATTCTAATTGTGGAAAGATAGATCATAGTGAACAAGATACACTAGGGGATATCGTGTCACATGATGAAGTTGAGATGGCTGAAATTAATAGGAAACATGCTGTTGACCTTCATCCCACTGATGTAAGTTCACAAGCATTTGATTCAGTGTCGCCATGCACGGACAGACTTTCATGTGAAGTAATGTTGACTGAAACTCTGACATCAACTTCAGAGGAGAAAATGAGGGTGGATGACAAAGCGACTAAGGCTGATGAGGATTTCAATGCTAAGAATTGTTGTGATTCACATGTTGAAGGTAGGCTAGATATAGGGAAATCCAGGGTCATTGGCGATACTAACATTAGAAGCTTGATGGCTGTTGGCAGGGAGCTTGTGACAAGTAGTCCTGTAGAGACAAGCAAAAAGCGTGATGGTGGAGGTCTCACCCTGGATCATGTACACTACAAAACTTGTGTTGCAGAAATCACAAAAAGTTTGGTCCCGGAGAAGGCCGCTCTTAAGCTTGATAGATGTGATCATGCTTCCAGCATTTCAGAAATACAGGATGTGATTGGGACTATAAAACAAGGTTGTATGTCAACTTGCATGGAGTCTACTATTACTACATTGGAGGACATTGACATGTCCACCTTTCCAAACCCAAGAGAAAAGGATAGTGGTCAAGCTGGTAAGCAGGCTTTCTCTTTGCTGCCCAACAAAGATGGGGTCAAGTGTGGCAAAGTAAACGCCAATGCCAAAATGACTTCTAGAAACAGAATTGAAGGGGCTAGAGTAGTGCAGGGGACTGAAGCCCACAGTGACTTTGTGAGGAGTCCTTGTGAAGGACTGAGACCAAGGAAGAAACATGATCTAGCACTTGCATCAACAGGGACTGTACAACAAAAGCATCCAGCAAAATGGAGTAAGAGATCTTCAGGCTGTTCAAATTCTTCTTCCCACAAACTGATGGATGGTAATAAGGCTTCTTACAAGTGTAATATTGAAGGCTGTCCAATGCTTATTACGACAGGGGCAGCGCTGTCGTTACACAAACGGAACAGATGCCATCACGAAGAATGTGGAAAGAGGTTCAGGTCCCATAAATATTTGATGCTTCACCAGCGGGTTCATGAGGATGAGAGGCCATTCAAGTGCACATGGAAGGGATGTGGTATGACTTTCAAGTGGGCTTGGGCTAGGACTGAACACTTAAGACTGCATACAGGTGAACGTCCTTACCAGTGCAAGGTTGAAGGTTGTGGCCTTACTTTCAGGTTTGTATCTGACTTCAGCCGTCATAGAAGGAAAACTGGGCATTTTGTAATACCTCCACATATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_87135.p1 GENE.R_Transcript_87135~~R_Transcript_87135.p1 ORF type:complete len:1340 (+),score=272.89,JmjC|PF02373.18|8.9e-37,JmjN|PF02375.13|1.1e-15,zf-H2C2_2|PF13465.2|3.4e+03,zf-H2C2_2|PF13465.2|0.031,zf-H2C2_2|PF13465.2|7.1e-05 R_Transcript_87135:382-4401(+)
MDNVEIPNWLKELPLAPVFRPTDTEFADPIAYISKIEKEASAFGICKVIPPLPKPSKRYVFNNLNSSLSKSFPQCSDLNFVDASSSNSLKRVSGGKVKVNVDDTEAKAVFTTRQQELGQASKRSRVSVNNAQQPAAQKQVWQSGEIYTLEQFESKSKAFSKSVLGKIKEVTPQVIEALFWKAASEKPIYVEYANDVPGSGFGEPEGLLCYFQAQKRRRRRLFGQRHQGKSYSMQQDVKTVNNTSSGEVMGKSIYPVLEPPKECANGPPSLLSAATEQPTQLGPKCSSGEVEGTAGWKLSNSPWNLQVIARSAGSLTRFMMEDIPGVTSPMVYIGMLFSWFAWHVEDHELHSLNFLHMGAPKTWYAVPGGHAFALEEVIRRQAYGGDIDHLAALKLLGEKTTLLSPELLIASGIPCCRLVQNPGEFVVTFPRAYHVGFSHGFNCGEAANFGTPQWLTIAKDAAVRRAAMDHLPMLSHQQLLYLLTMSFISRIPKSLLTGVRSSRLRDHLKKERELLVKKAFIDDVLKENNLLDTILQKNLACHAVLWHPDSLPSFTKEFLSPNRIPLDSVITNKDDLSAISEKNATQDGLAHQLTSYMETVNDFYLDTDDPLHDFQVDSGTLPCAACGILGYPFMCVVQPSKKASKEIFPAGCSTKMREGEIMQEPESCYHHRTDAISATSIQRCNGCGLRPRIFCLEHAIRIEELLRPKGGARMLIICHSDFQKIKVNAAAIAEEIGATFNYQEVVLEFASKEELSFIDLAVDSEQLTDCTEDWTSKLGMNLSYSVKARTSCPSKNIEQALNLDYLLSVIAPSSVISGIQWCSRKSRTKRDSSYGKILNLYNDNHLKQEKIFDQPGGNMEVKEKVLLQYSRKKYRIESRTYTGPKFISDCGMKFSLEVTDSNCGKIDHSEQDTLGDIVSHDEVEMAEINRKHAVDLHPTDVSSQAFDSVSPCTDRLSCEVMLTETLTSTSEEKMRVDDKATKADEDFNAKNCCDSHVEGRLDIGKSRVIGDTNIRSLMAVGRELVTSSPVETSKKRDGGGLTLDHVHYKTCVAEITKSLVPEKAALKLDRCDHASSISEIQDVIGTIKQGCMSTCMESTITTLEDIDMSTFPNPREKDSGQAGKQAFSLLPNKDGVKCGKVNANAKMTSRNRIEGARVVQGTEAHSDFVRSPCEGLRPRKKHDLALASTGTVQQKHPAKWSKRSSGCSNSSSHKLMDGNKASYKCNIEGCPMLITTGAALSLHKRNRCHHEECGKRFRSHKYLMLHQRVHEDERPFKCTWKGCGMTFKWAWARTEHLRLHTGERPYQCKVEGCGLTFRFVSDFSRHRRKTGHFVIPPHI*

Click here to download the sequence:
Link to NCBI Protein BLAST