Transcript Information: R_Transcript_87201.p1


Annotated TAIR IDAT3G20440.2
Annotated Gene NameAlpha amylase family protein
Annotated Gene Symbol(s)EMB2729, BE1
Annotation TypeOrtholog
Chromosome Positionchr3:7123603-7130364 | Reverse length=899
E-Value4.7E-200
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0024509448816
Replicate 20.76874326466995
Replicate 30.52418163835589
Condition 2: 8 Hour
Replicate 10.22412691027227
Replicate 21.0745503859609
Replicate 31.8276221219612
Condition 3: 24 Hour
Replicate 11.5235158114495
Replicate 21.2617424994609
Replicate 32.05353751067


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_87201.p1 GENE.R_Transcript_87201~~R_Transcript_87201.p1 ORF type:complete len:437 (+),score=75.24,CBM_48|PF02922.14|8.1e-06,CBM_48|PF02922.14|7.3e+02 R_Transcript_87201:220-1530(+)
ATGTACCTCACTTTGATTATACCACCTCAGTGTCCTCCATTACATCTAAACAACCCTTATAGTACCAAATTCCACCCCAAAATCAAACCCCATTTTCAAAAACTCAAACTTTCTTCCACCAAATTGAGATGCTCAATTTCCAAACAATTACCCCAAAAATGGCAAAACCCGGGTGGTAATTCTGATAAACGGGTCGACCCAGTTGGGTTCCTTACTCGTTTGGGCATTACCCACAAAGCCTTTTCTCAGTTCCTTCGTGAAAGGCATAAAGCTTTAAAGGATCTTAAAGATGGAATCTTTGATAGGTTCTTAAACTTGCGAGAATTGGCTTCTGGGTATGAATTATTGGGTATTCATCGCCACCCGCAACACCGTGCTGATTTCATGGAATGGGCTCCAGGTGCACGATATTGTGCTCTAATTGGTGAATTCAATGATTGGTCTCCTACTGAAAATTGTGCTCGAGAAGGCTATCTGGGCCATGATGATTATGGGTACTGGTTTATCATTCTTGATGATAAGTTGAGGGATGGAGAAGAACCAGATGATCTCTATTTTCAACAATACAACTATGTAGATGACTATGATAAAGGTGACAGTGGTGTTTCCATTGACGAAGTTTTTAAGAGAGCAAATGATGAGTATTGGGAGCCAGGGGAGGACCGATACCTCAAATCTCGCTTTGAAGTAGCATCAAAGTTGTATGAACAAATTTTTGGTCCTAATGGCCCACAAACATTAGAGGAATTGGAAGAAATACCAGATGCTGAAGCAAGATACAAAGCTTATAGAGAACAGCATAAAGACGAACCTCCTGAAAAATTCCGTTATGATGTGATTGATAATGGGAAAGAATATGACATATATAATATTGTGGACGATCCTATTTCACGGGAGAAATTTCGTAACAAGATGCCTCCTCTTGCTTACTGGTTTGAGACGCGAAAAGGAAGAAAAGCATGGTTGAAGAAGTACACTCCTTGTATTCCACATGGAAGCAAGTACAGAGTCTATTCTAACACGCCTGATGGGCCTTTGGAAAGAGTTCCAGCGTGGGCTACTTATGTTCTTCCGGATGTAGATGGAAATCTGTCATGTGCTGTTCACTGGGAGCCACCCCTTGAGAAAGTATACAAGTGGAAGAACAAGCACCCAAAAGTCCCAAAGTCATTGCGCATATATGAGTGCCATGTTGGAATTAGTGGGTCAGAGCACAATGTATCCTCTTTTAATGATTTTACTGAGAAGGTTTCAGCGACTGTTACTTCATGTTTTTTTTTTCCTTCAAATTTTCTGTTCTTATGGAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_87201.p1 GENE.R_Transcript_87201~~R_Transcript_87201.p1 ORF type:complete len:437 (+),score=75.24,CBM_48|PF02922.14|8.1e-06,CBM_48|PF02922.14|7.3e+02 R_Transcript_87201:220-1530(+)
MYLTLIIPPQCPPLHLNNPYSTKFHPKIKPHFQKLKLSSTKLRCSISKQLPQKWQNPGGNSDKRVDPVGFLTRLGITHKAFSQFLRERHKALKDLKDGIFDRFLNLRELASGYELLGIHRHPQHRADFMEWAPGARYCALIGEFNDWSPTENCAREGYLGHDDYGYWFIILDDKLRDGEEPDDLYFQQYNYVDDYDKGDSGVSIDEVFKRANDEYWEPGEDRYLKSRFEVASKLYEQIFGPNGPQTLEELEEIPDAEARYKAYREQHKDEPPEKFRYDVIDNGKEYDIYNIVDDPISREKFRNKMPPLAYWFETRKGRKAWLKKYTPCIPHGSKYRVYSNTPDGPLERVPAWATYVLPDVDGNLSCAVHWEPPLEKVYKWKNKHPKVPKSLRIYECHVGISGSEHNVSSFNDFTEKVSATVTSCFFFPSNFLFLWR*

Click here to download the sequence:
Link to NCBI Protein BLAST