Transcript Information: R_Transcript_87203.p1


Annotated TAIR IDAT3G20440.2
Annotated Gene NameAlpha amylase family protein
Annotated Gene Symbol(s)EMB2729, BE1
Annotation TypeOrtholog
Chromosome Positionchr3:7123603-7130364 | Reverse length=899
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0054597136074
Replicate 20.32621370703288
Replicate 31.0029786235603
Condition 2: 8 Hour
Replicate 11.0721212053172
Replicate 20.44216433019293
Replicate 30.97423898809987
Condition 3: 24 Hour
Replicate 10.81065703487656
Replicate 21.2772113199346
Replicate 31.3911676707774


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_87203.p1 GENE.R_Transcript_87203~~R_Transcript_87203.p1 ORF type:internal len:708 (+),score=116.15,Alpha-amylase|PF00128.20|1.3e-11,CBM_48|PF02922.14|1.6e-05,CBM_48|PF02922.14|1.4e+03 R_Transcript_87203:2-2122(+)
AAATTCCACCCCAAAATCAAACTCACTTTGATTATACCACCTCAATGTCCTCCATTACATCTAAACAACCCTTATAGTACCAAATTCCACCCCAAAATCAAACTCACTTTGATTATACCACCTCAATGTCCTCCATTACATCTAAACAACCCTTATAGTACCAAATTCCACCCCAAAATCAAACCCCATTTTCAAAAACTCAAACTTTCTTCCACCAAATTGAGATGCTCAATTTCCAAACAATTACCCCAAAAATGGCAAAACCCGGGTGGTAATTCTGATAAACGGGTCGACCCAGTTGGGTTCCTTACTCGTTTGGGCATTACCCACAAAGCCTTTTCTCAGTTCCTTCGTGAAAGGCATAAAGCTTTAAAGGATCTTAAAGATGGAATCTTTGATAGGTTCTTAAACTTGCGAGAATTGGCTTCTGGGTATGAATTATTGGGTATTCATCGCCACCCGCAACACCGTGCTGATTTCATGGAATGGGCTCCAGGTGCACGATATTGTGCTCTAATTGGTGAATTCAATGATTGGTCTCCTACTGAAAATTGTGCTCGAGAAGGCTATCTGGGCCATGATGATTATGGGTACTGGTTTATCATTCTTGATGATAAGTTGAGGGATGGAGAAGAACCAGATGATCTCTATTTTCAACAATACAACTATGTAGATGACTATGATAAAGGTGACAGTGGTGTTTCCATTGACGAAGTTTTTAAGAGAGCAAATGATGAGTATTGGGAGCCAGGGGAGGACCGATACCTCAAATCTCGCTTTGAAGTAGCATCAAAGTTGTATGAACAAATTTTTGGTCCTAATGGCCCACAAACATTAGAGGAATTGGAAGAAATACCAGATGCTGAAGCAAGATACAAAGCTTATAGAGAACAGCATAAAGACGAACCTCCTGAAAAATTCCGTTATGATGTGATTGATAATGGGAAAGAATATGACATATATAATATTGTGGACGATCCTATTTCACGGGAGAAATTTCGTAACAAGATGCCTCCTCTTGCTTACTGGTTTGAGACGCGAAAAGGAAGAAAAGCATGGTTGAAGAAGTACACTCCTTGTATTCCACATGGAAGCAAGTACAGAGTCTATTCTAACACGCCTGATGGGCCTTTGGAAAGAGTTCCAGCGTGGGCTACTTATGTTCTTCCGGATGTAGATGGAAATCTGTCATGTGCTGTTCACTGGGAGCCACCCCTTGAGAAAGTATACAAGTGGAAGAACAAGCACCCAAAAGTCCCAAAGTCATTGCGCATATATGAGTGCCATGTTGGAATTAGTGGGTCAGAGCACAATGTATCCTCTTTTAATGATTTTACTGAGAAGATCCTTCCTCATATAAAGGAGCTAGGATACAATGCAATTCAATTATTTGGGATTGTGGAGCACAAAGATTATTTCACAGCCGGTTATAGAGTGACAAACATGTATGCTGTTAGCAGTCGCTATGGAACTCCTGAGGACTTTAAACGCTTGGTTGATGAAGCTCATGGTGTAGGACTGCTAGTCTTCCTAGACATTGTGCATTCATACTCGGCAGCTGATGAGATGGTTGGATTGTCGCTTTTTGATGGAACCAATGACTGTTACTTTCATACAGGAAAACGAGGGCAGCACAAATACTGGGGAACTAGAATGTTCAAGTATGGCGACATTGATGTGCTACACTATCTTCTTTCTAATCTGAATTGGTGGGTAGAAGAATATCAAGTTGATGGCTTCCAATTTCACTCACTTTCTTCAATGATGTATACACACAATGGCTTTGCTACTTTTACTGGCGAGCTGGCAGAGTACTGTAATCAATATGTTGACAGGGATGCCCTAATGTACCTCATTTTGGCAAATGAAATTTTACATGCCCTTCATCCAAATATCATAACAATTGCAGAAGATGCATCATATTATCCTGGATTGTGTGAGCCTACTTCCCAAGGCGGACTAGGGTTTGATTATTATGTCAATCTCTCTGCATCTGAGATGTGGCTGTCTTTGCTCGATGTCCCTGATGATGAATGGATTATGAGTAAGATTGTAACCACATTAACGGGCAACAAAAGCTATGTAAATAAGATGCTTCTTTATGCTGAAAATCATAGCCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_87203.p1 GENE.R_Transcript_87203~~R_Transcript_87203.p1 ORF type:internal len:708 (+),score=116.15,Alpha-amylase|PF00128.20|1.3e-11,CBM_48|PF02922.14|1.6e-05,CBM_48|PF02922.14|1.4e+03 R_Transcript_87203:2-2122(+)
KFHPKIKLTLIIPPQCPPLHLNNPYSTKFHPKIKLTLIIPPQCPPLHLNNPYSTKFHPKIKPHFQKLKLSSTKLRCSISKQLPQKWQNPGGNSDKRVDPVGFLTRLGITHKAFSQFLRERHKALKDLKDGIFDRFLNLRELASGYELLGIHRHPQHRADFMEWAPGARYCALIGEFNDWSPTENCAREGYLGHDDYGYWFIILDDKLRDGEEPDDLYFQQYNYVDDYDKGDSGVSIDEVFKRANDEYWEPGEDRYLKSRFEVASKLYEQIFGPNGPQTLEELEEIPDAEARYKAYREQHKDEPPEKFRYDVIDNGKEYDIYNIVDDPISREKFRNKMPPLAYWFETRKGRKAWLKKYTPCIPHGSKYRVYSNTPDGPLERVPAWATYVLPDVDGNLSCAVHWEPPLEKVYKWKNKHPKVPKSLRIYECHVGISGSEHNVSSFNDFTEKILPHIKELGYNAIQLFGIVEHKDYFTAGYRVTNMYAVSSRYGTPEDFKRLVDEAHGVGLLVFLDIVHSYSAADEMVGLSLFDGTNDCYFHTGKRGQHKYWGTRMFKYGDIDVLHYLLSNLNWWVEEYQVDGFQFHSLSSMMYTHNGFATFTGELAEYCNQYVDRDALMYLILANEILHALHPNIITIAEDASYYPGLCEPTSQGGLGFDYYVNLSASEMWLSLLDVPDDEWIMSKIVTTLTGNKSYVNKMLLYAENHSQ

Click here to download the sequence:
Link to NCBI Protein BLAST