Transcript Information: R_Transcript_87204.p1


Annotated TAIR IDAT3G20440.2
Annotated Gene NameAlpha amylase family protein
Annotated Gene Symbol(s)EMB2729, BE1
Annotation TypeOrtholog
Chromosome Positionchr3:7123603-7130364 | Reverse length=899
E-Value2.5E-222
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47287463613261
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.57091394954717
Replicate 20.63722720272809
Replicate 30.94049795960554
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.3402233889155


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_87204.p1 GENE.R_Transcript_87204~~R_Transcript_87204.p1 ORF type:5prime_partial len:386 (+),score=47.55,Alpha-amylase_C|PF02806.14|1e-21 R_Transcript_87204:3-1160(+)
GTAGGACTGCTAGTCTTCCTAGACATTGTGCATTCATACTCGGCAGCTGATGAGATGGTTGGATTGTCGCTTTTTGATGGAACCAATGACTGTTACTTTCATACAGGAAAACGAGGGCAGCACAAATACTGGGGAACTAGAATGTTCAAGTATGGCGACATTGATGTGCTACACTATCTTCTTTCTAATCTGAATTGGTGGGTAGAAGAATATCAAGTTGATGGCTTCCAATTTCACTCACTTTCTTCAATGATGTATACACACAATGGCTTTGCTACTTTTACTGGCGAGCTGGCAGAGTACTGTAATCAATATGTTGACAGGGATGCCCTAATGTACCTCATTTTGGCAAATGAAATTTTACATGCCCTTCATCCAAATATCATAACAATTGCAGAAGATGCATCATATTATCCTGGATTGTGTGAGCCTACTTCCCAAGGCGGACTAGGGTTTGATTATTATGTCAATCTCTCTGCATCTGAGATGTGGCTGTCTTTGCTCGATGTCCCTGATGATGAATGGATTATGAGTAAGATTGTAACCACATTAACGGGCAACAAAAGCTATGTAAATAAGATGCTTCTTTATGCTGAAAATCATAGCCAGATGATCAGACTGATTACGTTTACTGTTGGTGGCTGTGCTTACCTTAATTTCATGGGAAATGAATTTGGGCATCCGAAGAGGGTTGAGTTCCCAACATCAAGCAATAACAACTCATTTGTGCTCGCTAACAGACGATGGGATTTGCTGGCCAACCAAGGAATTCATCAGGACTTGTTTTCCTTTGACAAGGACATGATGAAATTAGATCAAAGAGAAAAGGTTCTGTCGAGAGGCCTACCGACTTTTCACCATGTAAATGATGATACCATGGTTATTTCATACATGAGAGGCCCTCTTCTTTTCGTATTTAATTTTCATCCAACTAATTCATATGACAAATATAGTGTGGGCGTTGAAGAAGCTGGGGATTACCAAATTATACTGAACACCGATGAAAAGAAATATGGTGGAGAAGGAATAATTAGCAGCAATCAATATCTCCAAAGAAGCGTTAGGAAGAGAATTGATGGTCTCCAGAACTGTTTGCAAGTGCAATTGCCTAGTAGAACTGCTCAGGTCTACAAATTAGTGCGAATTTTGAGATTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_87204.p1 GENE.R_Transcript_87204~~R_Transcript_87204.p1 ORF type:5prime_partial len:386 (+),score=47.55,Alpha-amylase_C|PF02806.14|1e-21 R_Transcript_87204:3-1160(+)
VGLLVFLDIVHSYSAADEMVGLSLFDGTNDCYFHTGKRGQHKYWGTRMFKYGDIDVLHYLLSNLNWWVEEYQVDGFQFHSLSSMMYTHNGFATFTGELAEYCNQYVDRDALMYLILANEILHALHPNIITIAEDASYYPGLCEPTSQGGLGFDYYVNLSASEMWLSLLDVPDDEWIMSKIVTTLTGNKSYVNKMLLYAENHSQMIRLITFTVGGCAYLNFMGNEFGHPKRVEFPTSSNNNSFVLANRRWDLLANQGIHQDLFSFDKDMMKLDQREKVLSRGLPTFHHVNDDTMVISYMRGPLLFVFNFHPTNSYDKYSVGVEEAGDYQIILNTDEKKYGGEGIISSNQYLQRSVRKRIDGLQNCLQVQLPSRTAQVYKLVRILRL*

Click here to download the sequence:
Link to NCBI Protein BLAST