Transcript Information: R_Transcript_87207.p1


Annotated TAIR IDAT3G20440.2
Annotated Gene NameAlpha amylase family protein
Annotated Gene Symbol(s)EMB2729, BE1
Annotation TypeOrtholog
Chromosome Positionchr3:7123603-7130364 | Reverse length=899
E-Value1.2E-248
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.9719264123167
Replicate 28.3785711875014
Replicate 39.6850339480169
Condition 2: 8 Hour
Replicate 17.8517619189504
Replicate 28.4981973743223
Replicate 39.6147486183997
Condition 3: 24 Hour
Replicate 19.7611579424205
Replicate 28.6439850758795
Replicate 311.229796228907


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_87207.p1 GENE.R_Transcript_87207~~R_Transcript_87207.p1 ORF type:5prime_partial len:421 (+),score=54.15,Alpha-amylase_C|PF02806.14|1.2e-21 R_Transcript_87207:3-1265(+)
GTAGGACTGCTAGTCTTCCTAGACATTGTGCATTCATACTCGGCAGCTGATGAGATGGTTGGATTGTCGCTTTTTGATGGAACCAATGACTGTTACTTTCATACAGGAAAACGAGGGCAGCACAAATACTGGGGAACTAGAATGTTCAAGTATGGCGACATTGATGTGCTACACTATCTTCTTTCTAATCTGAATTGGTGGGTAGAAGAATATCAAGTTGATGGCTTCCAATTTCACTCACTTTCTTCAATGATGTATACACACAATGGCTTTGCTACTTTTACTGGCGAGCTGGCAGAGTACTGTAATCAATATGTTGACAGGGATGCCCTAATGTACCTCATTTTGGCAAATGAAATTTTACATGCCCTTCATCCAAATATCATAACAATTGCAGAAGATGCATCATATTATCCTGGATTGTGTGAGCCTACTTCCCAAGGCGGACTAGGGTTTGATTATTATGTCAATCTCTCTGCATCTGAGATGTGGCTGTCTTTGCTCGATGTCCCTGATGATGAATGGATTATGAGTAAGATTGTAACCACATTAACGGGCAACAAAAGCTATGTAAATAAGATGCTTCTTTATGCTGAAAATCATAGCCAGTCCATATCTGGGGGAAAGTCTTTTGCGGAGATACTATTTGGTAACATCAAGGAGCAGCCAAGTCAATCAACTGACTCATTGCTTAGAGGGTATTCATTGCACAAAATGATCAGACTGATTACGTTTACTGTTGGTGGCTGTGCTTACCTTAATTTCATGGGAAATGAATTTGGGCATCCGAAGAGGGTTGAGTTCCCAACATCAAGCAATAACAACTCATTTGTGCTCGCTAACAGACGATGGGATTTGCTGGCCAACCAAGGAATTCATCAGGACTTGTTTTCCTTTGACAAGGACATGATGAAATTAGATCAAAGAGAAAAGGTTCTGTCGAGAGGCCTACCGACTTTTCACCATGTAAATGATGATACCATGGTTATTTCATACATGAGAGGCCCTCTTCTTTTCGTATTTAATTTTCATCCAACTAATTCATATGACAAATATAGTGTGGGCGTTGAAGAAGCTGGGGATTACCAAATTATACTGAACACCGATGAAAAGAAATATGGTGGAGAAGGAATAATTAGCAGCAATCAATATCTCCAAAGAAGCGTTAGGAAGAGAATTGATGGTCTCCAGAACTGTTTGCAAGTGCAATTGCCTAGTAGAACTGCTCAGGTCTACAAATTAGTGCGAATTTTGAGATTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_87207.p1 GENE.R_Transcript_87207~~R_Transcript_87207.p1 ORF type:5prime_partial len:421 (+),score=54.15,Alpha-amylase_C|PF02806.14|1.2e-21 R_Transcript_87207:3-1265(+)
VGLLVFLDIVHSYSAADEMVGLSLFDGTNDCYFHTGKRGQHKYWGTRMFKYGDIDVLHYLLSNLNWWVEEYQVDGFQFHSLSSMMYTHNGFATFTGELAEYCNQYVDRDALMYLILANEILHALHPNIITIAEDASYYPGLCEPTSQGGLGFDYYVNLSASEMWLSLLDVPDDEWIMSKIVTTLTGNKSYVNKMLLYAENHSQSISGGKSFAEILFGNIKEQPSQSTDSLLRGYSLHKMIRLITFTVGGCAYLNFMGNEFGHPKRVEFPTSSNNNSFVLANRRWDLLANQGIHQDLFSFDKDMMKLDQREKVLSRGLPTFHHVNDDTMVISYMRGPLLFVFNFHPTNSYDKYSVGVEEAGDYQIILNTDEKKYGGEGIISSNQYLQRSVRKRIDGLQNCLQVQLPSRTAQVYKLVRILRL*

Click here to download the sequence:
Link to NCBI Protein BLAST