Transcript Information: R_Transcript_87209.p1


Annotated TAIR IDAT3G20440.2
Annotated Gene NameAlpha amylase family protein
Annotated Gene Symbol(s)EMB2729, BE1
Annotation TypeOrtholog
Chromosome Positionchr3:7123603-7130364 | Reverse length=899
E-Value7.2E-198
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4502352539366
Replicate 20.86286166094376
Replicate 30.94137277792407
Condition 2: 8 Hour
Replicate 10.93918386099023
Replicate 20.55136420978266
Replicate 32.4367915627369
Condition 3: 24 Hour
Replicate 12.2014335697799
Replicate 20.84595513552899
Replicate 32.2787199400057


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_87209.p1 GENE.R_Transcript_87209~~R_Transcript_87209.p1 ORF type:complete len:365 (+),score=70.63,Alpha-amylase|PF00128.20|2.9e+03,Alpha-amylase|PF00128.20|9.9e-08 R_Transcript_87209:123-1217(+)
ATGAATATTCTTTTGTTAGTTCCTTTCATATTACTCTTAAACAATGGGATTACAGGTGCACGATATTGTGCTCTAATTGGTGAATTCAATGATTGGTCTCCTACTGAAAATTGTGCTCGAGAAGGCTATCTGGGCCATGATGATTATGGGTACTGGTTTATCATTCTTGATGATAAGTTGAGGGATGGAGAAGAACCAGATGATCTCTATTTTCAACAATACAACTATGTAGATGACTATGATAAAGGTGACAGTGGTGTTTCCATTGACGAAGTTTTTAAGAGAGCAAATGATGAGTATTGGGAGCCAGGGGAGGACCGATACCTCAAATCTCGCTTTGAAGTAGCATCAAAGTTGTATGAACAAATTTTTGGTCCTAATGGCCCACAAACATTAGAGGAATTGGAAGAAATACCAGATGCTGAAGCAAGATACAAAGCTTATAGAGAACAGCATAAAGACGAACCTCCTGAAAAATTCCGTTATGATGTGATTGATAATGGGAAAGAATATGACATATATAATATTGTGGACGATCCTATTTCACGGGAGAAATTTCGTAACAAGATGCCTCCTCTTGCTTACTGGTTTGAGACGCGAAAAGGAAGAAAAGCATGGTTGAAGAAGTACACTCCTTGTATTCCACATGGAAGCAAGTACAGAGTCTATTCTAACACGCCTGATGGGCCTTTGGAAAGAGTTCCAGCGTGGGCTACTTATGTTCTTCCGGATGTAGATGGAAATCTGTCATGTGCTGTTCACTGGGAGCCACCCCTTGAGAAAGTATACAAGTGGAAGAACAAGCACCCAAAAGTCCCAAAGTCATTGCGCATATATGAGTGCCATGTTGGAATTAGTGGGTCAGAGCACAATGTATCCTCTTTTAATGATTTTACTGAGAAGATCCTTCCTCATATAAAGGAGCTAGGATACAATGCAATTCAATTATTTGGGATTGTGGAGCACAAAGATTATTTCACAGCCGGTTATAGAGTGACAAACATGTATGCTGTTAGCAGTCGCTATGGAACTCCTGAGGACTTTAAACGTTTGGTTGATGAAGCTCATGGTTGTTTCTTAAGCACCATTGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_87209.p1 GENE.R_Transcript_87209~~R_Transcript_87209.p1 ORF type:complete len:365 (+),score=70.63,Alpha-amylase|PF00128.20|2.9e+03,Alpha-amylase|PF00128.20|9.9e-08 R_Transcript_87209:123-1217(+)
MNILLLVPFILLLNNGITGARYCALIGEFNDWSPTENCAREGYLGHDDYGYWFIILDDKLRDGEEPDDLYFQQYNYVDDYDKGDSGVSIDEVFKRANDEYWEPGEDRYLKSRFEVASKLYEQIFGPNGPQTLEELEEIPDAEARYKAYREQHKDEPPEKFRYDVIDNGKEYDIYNIVDDPISREKFRNKMPPLAYWFETRKGRKAWLKKYTPCIPHGSKYRVYSNTPDGPLERVPAWATYVLPDVDGNLSCAVHWEPPLEKVYKWKNKHPKVPKSLRIYECHVGISGSEHNVSSFNDFTEKILPHIKELGYNAIQLFGIVEHKDYFTAGYRVTNMYAVSSRYGTPEDFKRLVDEAHGCFLSTIA*

Click here to download the sequence:
Link to NCBI Protein BLAST