Transcript Information: R_Transcript_87235.p2


Annotated TAIR IDAT1G74400.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27963953-27965341 | Forward length=462
E-Value4.6E-137
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0683856777329
Replicate 21.4480207183654
Replicate 32.7646062616046
Condition 2: 8 Hour
Replicate 13.482903203703
Replicate 24.57819779076
Replicate 34.5770225055717
Condition 3: 24 Hour
Replicate 15.5415396756527
Replicate 23.7075650721229
Replicate 35.330410839697


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_87235.p2 GENE.R_Transcript_87235~~R_Transcript_87235.p2 ORF type:complete len:464 (+),score=69.29,PPR|PF01535.16|3e+03,PPR|PF01535.16|0.044,PPR|PF01535.16|0.00011,PPR|PF01535.16|6.1e+03,PPR|PF01535.16|0.025,PPR|PF01535.16|2.3e-06,PPR|PF01535.16|0.077,PPR|PF01535.16|0.0094,PPR|PF01535.16|9,PPR|PF01535.16|7.3e+03,PPR_2|PF13041.2|1.4e+04,PPR_2|PF13041.2|3.7,PPR_2|PF13041.2|5.1e-10,PPR_2|PF13041.2|0.34,PPR_2|PF13041.2|2.3e-06,PPR_2|PF13041.2|13,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|2.1e+02,PPR_3|PF13812.2|6.4,PPR_3|PF13812.2|12,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|6.9,PPR_3|PF13812.2|6.5e+02,PPR_3|PF13812.2|1.3e+02,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|36,PPR_1|PF12854.3|9.5e+02,PPR_1|PF12854.3|7.5,PPR_1|PF12854.3|0.049,PPR_1|PF12854.3|6.7e+02,PPR_1|PF12854.3|0.0057,PPR_1|PF12854.3|62 R_Transcript_87235:2798-4189(+)
ATGATGTATTTCAAATTAATTCGAGGAATGGTTAAAGCTTCTTGCACTAGTCAACCCAAATCTAAGCTTGAACCCTTGCTCAAACCACCCAGAGCAAATCAAACCCTCAAAAGATATCTTGAGACGGATGCTACCACAAGAGTTCTGGTATTCTTCAGGGAGCTTTGGAGGCAAAATCCTGCTGCTGTGGACAGCTACTCACTTCTGTTTGCGCTCAAGGCCTGTACCCGGGAGTCCTTAATAGTCGAGGGACATCAGTTACACGCCAGTGTCAAGAAACTGGGTTGTGAACCCATAATTTTCATCCAAACATGTTTGATAGACTTGTACTCAATGATGGGAAATGTAGATTTAGCCCATCGTATGTTTGATGAAATACCCTGCAAAAATGCTGTCTGCTGGACTTCTCTGATTACTGCTTACATTGATAATGACATGCCTAGCAAAGGAGTTAAAATATTCAAGCAGATGCTGATGAATAAGATAGAGCCTGATCAAGTTACACTAACTGTTGTCCTGACAGCATGTGCTGATCTTGGAGCATTGTCTCTAGGAAAATGGATTCATACTTATATTGGTTGTAAAGATGGACTTACAAGTGACCTCTGCCTGAATAATGCTCTCATCAACATGTATGTCAAGTGTGGAGATGTCAGAACAGCACAGAGATTGTTTTATAGCTCTAGGCAAAAGGATGTATTTACATGGACTTCTATGATTGTAGGGTATGCACCGCATGGACAATGTGTGGAGGCTCTTGATCTGTTTGCGGATATGAAACAAACAAATAAAAATATCAAGGGAATGTTCTCTGTGATTCCCAATGAAGTCACGTTCTTAGGAGTTCTGATGGCTTGTAGTCATGCTGGGATGGTAGAGGAGGGTAAGCAGCATTTCAAAAGCATGATGCAAGATTATGGACTGTCTCCCAGGCTACCACATTTTGGCTCTATGGTGGATCTCTTCTGCAGAGCTGGGCTCTTGGAAGAGGCTTATGATTTTATTTTGGGTATGCTAGTTCAACCAAATGCAGTCATATGGAGAACATTGCTAGGAGCGTGTTTTCTTCACGGCGATGTTGAGCTGGGTGCAAAGGTCTGGATAAAGCTTCTTGAGCTGGAGCCTACATATGTTGGTGATGATATTGCCCTGTCAAATTTGTTCGCATCAAAAGGTCTTTGGTTCGAGAAAATGATGGTGAGAGATCGAATGGAATGCCGTAGGGCTCCTGGTTGCAGTTCAGTCGAGGTGGAAAGTGATATAATAGAGTTTGTTGCAGGAGACTCTCGTCATCCCCTCAAAGATGAGATTTATAAGGTCCTCAGACAATTGATGGGAACAGTAAGGGCGTACAGTTTTATATCAGAACCGTCAGATATCATGGATTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_87235.p2 GENE.R_Transcript_87235~~R_Transcript_87235.p2 ORF type:complete len:464 (+),score=69.29,PPR|PF01535.16|3e+03,PPR|PF01535.16|0.044,PPR|PF01535.16|0.00011,PPR|PF01535.16|6.1e+03,PPR|PF01535.16|0.025,PPR|PF01535.16|2.3e-06,PPR|PF01535.16|0.077,PPR|PF01535.16|0.0094,PPR|PF01535.16|9,PPR|PF01535.16|7.3e+03,PPR_2|PF13041.2|1.4e+04,PPR_2|PF13041.2|3.7,PPR_2|PF13041.2|5.1e-10,PPR_2|PF13041.2|0.34,PPR_2|PF13041.2|2.3e-06,PPR_2|PF13041.2|13,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|2.1e+02,PPR_3|PF13812.2|6.4,PPR_3|PF13812.2|12,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|6.9,PPR_3|PF13812.2|6.5e+02,PPR_3|PF13812.2|1.3e+02,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|36,PPR_1|PF12854.3|9.5e+02,PPR_1|PF12854.3|7.5,PPR_1|PF12854.3|0.049,PPR_1|PF12854.3|6.7e+02,PPR_1|PF12854.3|0.0057,PPR_1|PF12854.3|62 R_Transcript_87235:2798-4189(+)
MMYFKLIRGMVKASCTSQPKSKLEPLLKPPRANQTLKRYLETDATTRVLVFFRELWRQNPAAVDSYSLLFALKACTRESLIVEGHQLHASVKKLGCEPIIFIQTCLIDLYSMMGNVDLAHRMFDEIPCKNAVCWTSLITAYIDNDMPSKGVKIFKQMLMNKIEPDQVTLTVVLTACADLGALSLGKWIHTYIGCKDGLTSDLCLNNALINMYVKCGDVRTAQRLFYSSRQKDVFTWTSMIVGYAPHGQCVEALDLFADMKQTNKNIKGMFSVIPNEVTFLGVLMACSHAGMVEEGKQHFKSMMQDYGLSPRLPHFGSMVDLFCRAGLLEEAYDFILGMLVQPNAVIWRTLLGACFLHGDVELGAKVWIKLLELEPTYVGDDIALSNLFASKGLWFEKMMVRDRMECRRAPGCSSVEVESDIIEFVAGDSRHPLKDEIYKVLRQLMGTVRAYSFISEPSDIMDY*

Click here to download the sequence:
Link to NCBI Protein BLAST