Transcript Information: R_Transcript_87323.p1


Annotated TAIR IDAT1G55900.1
Annotated Gene NameHaloacid dehalogenase-like hydrolase (HAD) superfamily protein
Annotated Gene Symbol(s)TIM50, emb1860
Annotation TypeOrtholog
Chromosome Positionchr1:20903163-20905420 | Forward length=376
E-Value5.8E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.685035308801
Replicate 224.590775759306
Replicate 325.894572934781
Condition 2: 8 Hour
Replicate 116.301730739334
Replicate 216.952951178508
Replicate 321.40706252513
Condition 3: 24 Hour
Replicate 129.071571108995
Replicate 232.903090029693
Replicate 329.143954610271


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_87323.p1 GENE.R_Transcript_87323~~R_Transcript_87323.p1 ORF type:complete len:368 (+),score=72.47,NIF|PF03031.14|2e-39 R_Transcript_87323:110-1213(+)
ATGTCTCTCTCTTTACTTCGATCTCGTGTTTCTAACACCACCATCAACAACCTTTGCAGCAAAAACAAGGGCCATCTTATTATTTGCCAAAGATTATTTTGCACTAAGTTTCCTAAAGAGCCTCCATTATCCTCTGCTCTTGATTCTTCTTCCTTAAACCCTGAAAACCCTTCAACTCCTCCACCTCCTTCACCCCCAATTAAGCGAAACCCATTCATCACTGCTCTCAAATTTGGTATTGCTGGCGCTATTACTGGTGTTGCTGGTCTTGCTGGTTATGCTACTTATGCATATACATTGGAAGAAGTAGACGAGAAGACAAAGGCCTTCCGAGCTTATGCAAATTACTCCACAGAAGATGATGAATCTGCTATTAATAAAACCCTATCTACTATGCGATATGGTGTTCTCACAGTGCCTGCCAAAGCAATTGAACTTTACCTAGATCTGAGGAGATCCATTGAGGAGCAAGTTCGTGGTTTCACCGAACCCTTGTCGGATAAGCTTCTTCCTGATTTGCCTCCAAATATGCAACACGTTTTTACACTTGTCCTGGATCTGAATGAGACTTTAGTCTACTCTGATTGGAAGCGTGAAAGGGGCTGGAGAACTTTTAAAAGGCCAGGTGTGGATGCCTTTCTGGAGCATCTAGCACAGTTTTATGAAATTGTTGTGTATTCTGACCACTTGAATATGTATGTCGACCCCGTTGTTGACAGATTGGATGAGAAACGTGCTGTTAGTTTTAGGTTATCAAGGTCTGCAACAAGATATCAGGATGGGAAACATTACAGGGACCTTTCGAAACTGAACCGTGATCCCACAAAGATTATCTATATAAGTGGCCATGCTCTAGAGAACTGCCTTCAGCCAGAAAACAGTATCGAGATCAAGCCATGGACAAGTGATGATGTGAATGATACCACTCTCGTGGATCTCATTCCATTTCTTGAATATGTTTCCCAGAGTATGCCACCTGATATTCGGAAGGTGCTCTCATCATATCAAGGGCGTGATGTTGCTAAGGAGTTCATAGAGCGCTCTAAAGACTTTCAAAGGCGTAAGCAGGAACAGAAACAGCACGGACGTTTCTGGCGACGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_87323.p1 GENE.R_Transcript_87323~~R_Transcript_87323.p1 ORF type:complete len:368 (+),score=72.47,NIF|PF03031.14|2e-39 R_Transcript_87323:110-1213(+)
MSLSLLRSRVSNTTINNLCSKNKGHLIICQRLFCTKFPKEPPLSSALDSSSLNPENPSTPPPPSPPIKRNPFITALKFGIAGAITGVAGLAGYATYAYTLEEVDEKTKAFRAYANYSTEDDESAINKTLSTMRYGVLTVPAKAIELYLDLRRSIEEQVRGFTEPLSDKLLPDLPPNMQHVFTLVLDLNETLVYSDWKRERGWRTFKRPGVDAFLEHLAQFYEIVVYSDHLNMYVDPVVDRLDEKRAVSFRLSRSATRYQDGKHYRDLSKLNRDPTKIIYISGHALENCLQPENSIEIKPWTSDDVNDTTLVDLIPFLEYVSQSMPPDIRKVLSSYQGRDVAKEFIERSKDFQRRKQEQKQHGRFWRR*

Click here to download the sequence:
Link to NCBI Protein BLAST