Transcript Information: R_Transcript_87357.p1


Annotated TAIR IDAT5G08710.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2834858-2837866 | Reverse length=434
E-Value1.5E-207
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.951776572831
Replicate 26.5706069538062
Replicate 39.0010004201352
Condition 2: 8 Hour
Replicate 16.2799041864699
Replicate 28.2077589817058
Replicate 311.574321125
Condition 3: 24 Hour
Replicate 111.181802579141
Replicate 28.4588404686214
Replicate 311.793610290116


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_87357.p1 GENE.R_Transcript_87357~~R_Transcript_87357.p1 ORF type:complete len:425 (+),score=79.22,RCC1|PF00415.14|2.9e-09,RCC1|PF00415.14|1.2e-09,RCC1|PF00415.14|2.7e-11,RCC1|PF00415.14|1.5e-07,RCC1|PF00415.14|4.7e-05,RCC1|PF00415.14|2.4e-13,RCC1|PF00415.14|20,RCC1|PF00415.14|6.9e-06,RCC1_2|PF13540.2|1.6e+04,RCC1_2|PF13540.2|4.6e-08,RCC1_2|PF13540.2|2e-10,RCC1_2|PF13540.2|0.0024,RCC1_2|PF13540.2|0.0059,RCC1_2|PF13540.2|7.4e-12,RCC1_2|PF13540.2|0.018,RCC1_2|PF13540.2|15 R_Transcript_87357:175-1449(+)
ATGTGGCTTAGAACGTACGCTAAGTTCCACTACAAATTAGCAGCTCAAAACACTAAGCTAGGGTTAGGGTTTCGATCATCAAGATGTTATTCAACCGGAGAAAGAGGAGGAAAAACATTCGCCGCGCTTTGGGGAAATGGCGATTTTGGAAGGCTTGGCCTTGGGACTGTCAATTCTCAGTGGAAACCCGTCGTTTGCTCTGCTTTTAATGGCGATTATCTTCGCTCCATTGCTTGTGGTGGTGCTCACACACTTTTCCTCACAGAATCTGGGCGGGTATATGCCTCTGGCCTCAATGATTTCGGACAGCTTGGGATTTCGGATGATTCGGAATACGCTATGGAACCACGAAAAGTTGCTGGAATTGAGAAAGAGATCAGACATATATCAGCTGGCTACTGTCATTCATGTGCGATTACAGTGGATGGGGAGCTCTACATGTGGGGAAAGAACACTAATGGACAGCTTGGCATTGGCAAGAGTGCACCCAATGTTGTTCCTAGGCCAGTCAAAGTTGAATATTTGACCGGGATGATCGTTGAAATGGCTGCTTTAGGTTCAGAGCATTCCATTGCTGTCACGGATGAAGGTGTTGCCTTGAGCTGGGGAGCAGGTAGTTCGGGAAGACTTGGTCATGACCGCCGTTCAAGCTTGTTAGGCTTTCTAAGCAGCGTCAGTGAATATACACCAAGGCTCATCAAGAGACTTGAAGGGGTTAAGGTCAAAGCTGTTGCCGCTGGACTGCTGCATTCAGCTTGTATTGATGAAAATGGCAGCGTCTTTGTCTTTGGTGAGAGAGCAGTGGACAAGCTTGGCTTTGGAAATTCAGACTATGCTACTGGGCCATCAAAGGTGTCAGAACTGCCGTTTTCAGAAGAAGTTGCCTGTGGTGGTTATCACACTTGTGTCATAACAAGAAATGGAGAGCTATACACATGGGGTTCTAATGAAAATGGGTGTCTCGGCATCGGCTGTACGGATGTCATTCATTCCCCCGAGAGAGTTGATGGGCCATTCTTAAGGCTATCAGTGAAGAAGGTTTCTTGTGGTTGGAAGCACACAGCTGCGATTTCCGATGGGCATGTATTCACATGGGGTTGGGGAGGTTCTCATGGTACATTTTCAGTGGATGGACAATCTTCTGGTGGACAGTTGGGCCATGGAAATGATGTTGATTATATTGAACCATCTTTGGTTGATTTTGGCAATGACGTGAAGGCATTGCAAGTTTCATGTGGATTCAATCACACAGGTGCAATATTTGAATACAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_87357.p1 GENE.R_Transcript_87357~~R_Transcript_87357.p1 ORF type:complete len:425 (+),score=79.22,RCC1|PF00415.14|2.9e-09,RCC1|PF00415.14|1.2e-09,RCC1|PF00415.14|2.7e-11,RCC1|PF00415.14|1.5e-07,RCC1|PF00415.14|4.7e-05,RCC1|PF00415.14|2.4e-13,RCC1|PF00415.14|20,RCC1|PF00415.14|6.9e-06,RCC1_2|PF13540.2|1.6e+04,RCC1_2|PF13540.2|4.6e-08,RCC1_2|PF13540.2|2e-10,RCC1_2|PF13540.2|0.0024,RCC1_2|PF13540.2|0.0059,RCC1_2|PF13540.2|7.4e-12,RCC1_2|PF13540.2|0.018,RCC1_2|PF13540.2|15 R_Transcript_87357:175-1449(+)
MWLRTYAKFHYKLAAQNTKLGLGFRSSRCYSTGERGGKTFAALWGNGDFGRLGLGTVNSQWKPVVCSAFNGDYLRSIACGGAHTLFLTESGRVYASGLNDFGQLGISDDSEYAMEPRKVAGIEKEIRHISAGYCHSCAITVDGELYMWGKNTNGQLGIGKSAPNVVPRPVKVEYLTGMIVEMAALGSEHSIAVTDEGVALSWGAGSSGRLGHDRRSSLLGFLSSVSEYTPRLIKRLEGVKVKAVAAGLLHSACIDENGSVFVFGERAVDKLGFGNSDYATGPSKVSELPFSEEVACGGYHTCVITRNGELYTWGSNENGCLGIGCTDVIHSPERVDGPFLRLSVKKVSCGWKHTAAISDGHVFTWGWGGSHGTFSVDGQSSGGQLGHGNDVDYIEPSLVDFGNDVKALQVSCGFNHTGAIFEYK*

Click here to download the sequence:
Link to NCBI Protein BLAST