Transcript Information: R_Transcript_87365.p1


Annotated TAIR IDAT3G13980.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54200.1); Has 1485 Blast hits to 418 proteins in 98 species: Archae - 0; Bacteria - 6; Metazoa - 246; Fungi - 61; Plants - 107; Viruses - 6; Other Eukaryotes - 1059 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:4619189-4620262 | Reverse length=357
E-Value2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4519416962729
Replicate 22.3044719969108
Replicate 33.4918807311208
Condition 2: 8 Hour
Replicate 12.5381689274583
Replicate 25.3175267793063
Replicate 34.5379026550967
Condition 3: 24 Hour
Replicate 14.3395855125538
Replicate 22.5551824324449
Replicate 32.9361555067789


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_87365.p1 GENE.R_Transcript_87365~~R_Transcript_87365.p1 ORF type:5prime_partial len:164 (+),score=9.06 R_Transcript_87365:3-494(+)
TCGCGATCGTGTCTCAGCAAAACGCCGTCGTCTCGAGGAAAATCAAGCACCAGTAGCACCGCCACCACCACCACCACAACAACCACCACCACGAAGCGTTCGGTGAGATTCTATCCAGTAAGCGTAATCGTCGACGAAGATTCTAGACCTTGCGGCCATAAATCCGTGCTGAAAGACGATCACTACGATTTCTCGAAACCTCTGATTTCGAATCATGAGAACAATAATAATCAGAGGAACATGAGGAGAGAGAAAGAGATCGATACGTTGATGATGATGATAAAGAGGAACTGCGAAGAGCGTAGAGTGACGAGATTCAATTGTGAAGAATCAGATGAAGAGATGAAGATAATAAATGAAAATGATGGAGGAGAAAGTTGTGCGAGTTCGGATTTGTTTGAGTTGGAGAATTTGAGTTCCATTGGTGTAAGTCGTTATACTGAGGAGTTGCCAGTGTACGGTACCACCACTTTGGACAGCCTAACGGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_87365.p1 GENE.R_Transcript_87365~~R_Transcript_87365.p1 ORF type:5prime_partial len:164 (+),score=9.06 R_Transcript_87365:3-494(+)
SRSCLSKTPSSRGKSSTSSTATTTTTTTTTTKRSVRFYPVSVIVDEDSRPCGHKSVLKDDHYDFSKPLISNHENNNNQRNMRREKEIDTLMMMIKRNCEERRVTRFNCEESDEEMKIINENDGGESCASSDLFELENLSSIGVSRYTEELPVYGTTTLDSLTA*

Click here to download the sequence:
Link to NCBI Protein BLAST