Transcript Information: R_Transcript_87420.p1


Annotated TAIR IDAT1G80400.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:30225864-30227360 | Forward length=407
E-Value1E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.1905603761013
Replicate 24.6355468451567
Replicate 36.1481287054608
Condition 2: 8 Hour
Replicate 14.8759731063778
Replicate 26.4856237374867
Replicate 38.4864673030381
Condition 3: 24 Hour
Replicate 17.1556801748688
Replicate 26.4924571625942
Replicate 38.5276771507392


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_87420.p1 GENE.R_Transcript_87420~~R_Transcript_87420.p1 ORF type:3prime_partial len:231 (-),score=30.69 R_Transcript_87420:3-692(-)
ATGGAGCGGCCGGATGATTTTAATGGCCATCAGCATGTCATTGACATTGCTGTGACCAATGATGCTCCATTAGGTTCCTCAAATAGTGATCATGTACATCAGACAGAGTCACATCATAATGTAGATAGATCATCAAGTATTAGTACAGAAGTTCACCTGCCGCAAGTTTCACTGTCTTCCCCAAATAGAGTGAACTCCAGAAATTCTTCGTTTGTGGGCAGAGGTGAAGCATACACCAGCCCTTTGAATTCTGGCCTGTGGATATCAGTTGAGCTAATTGTCACCTTGGCTCAAATTGTTGCTTCTGTTGTTATTTTGTCACTTTCAAGATATAAAAGTAGTGAAGCTCCATTATTTGCATGGGTTGTGGGTTATGCATGTGGATGTCTAGCAACACTTCCAATTCTGTACTGGCGTCTTCGAAATTGTATCCAGGGTCCTGAACGACATTCATTTCAATCACACCAGAGCTCTTCAAGGGCCATGACTTCGTTCGAAACTAATACTTCCTCATCAATATCCATCATTCAAGAAGGAGAGAGAAGCCATCAAAATTCACATGTAATTGCCAGAAACAATGGGACGAGAGGACGAATTAGTGTAAGATTCAATGGAATCGTGGACCACTTCAAGATGGCCTTGGACTGCTTCTTTGCAGTGTGGTTTGTCGTGGGTAATGTGTTCACCCCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_87420.p1 GENE.R_Transcript_87420~~R_Transcript_87420.p1 ORF type:3prime_partial len:231 (-),score=30.69 R_Transcript_87420:3-692(-)
MERPDDFNGHQHVIDIAVTNDAPLGSSNSDHVHQTESHHNVDRSSSISTEVHLPQVSLSSPNRVNSRNSSFVGRGEAYTSPLNSGLWISVELIVTLAQIVASVVILSLSRYKSSEAPLFAWVVGYACGCLATLPILYWRLRNCIQGPERHSFQSHQSSSRAMTSFETNTSSSISIIQEGERSHQNSHVIARNNGTRGRISVRFNGIVDHFKMALDCFFAVWFVVGNVFTP

Click here to download the sequence:
Link to NCBI Protein BLAST