Transcript Information: R_Transcript_87472.p1


Annotated TAIR IDAT5G53110.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21529022-21533008 | Forward length=382
E-Value8E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27551639176934
Replicate 20.15846264465131
Replicate 30.43220259615382
Condition 2: 8 Hour
Replicate 10.55439694220178
Replicate 20.16876137238631
Replicate 30.8219597262062
Condition 3: 24 Hour
Replicate 11.2128652875013
Replicate 20.49936435223949
Replicate 31.8170924645726


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_87472.p1 GENE.R_Transcript_87472~~R_Transcript_87472.p1 ORF type:complete len:265 (+),score=-0.06 R_Transcript_87472:385-1179(+)
ATGCAAAATCTTGTTCACACAACAACTAGCATCATACCGATTATTTTCTCTCTCCTAATAATCCAATCTACAGCCCTCGAAAGTTGCGCCCCTTTCTCGTGCAATCGTCATCGCCGTGACACAATCCAGTTCCCATTTTGGGTGCCCCGAACCCAATCAAACCGGTGCGGATATCCGGGTTTCAACCTCTCATGTGACGGCGACGAAACACTCCTCCACCTCAAAAATTCCAACCCCTTCACTGTACGTGCAATCGATTACCCAGACCAGCTCATTTGGGTCACCGACCCGAACCGTTGTCTCCCAAAACGGGTCCTGGAGTTGAACCTGACCAAAACACCGTTCGTGTCGGGTCCGTCAAACACAGAGTACTCCTTCCTGAACTGCTCAAGTGCGGTGAATAATAATGATTCGGTTTTTGTTCCAGACGGTACGTCGGTAGTTTCTTGCTTAAGTGAGAGGAATTTCACGGTGTTTTTGACATTTGAGAAAGGGTCGGAACAGAAGATGGTGAATGAATGGAAGTGTAAAGTAATTAAGAGGGTGGTTGCTCCCATTTGGTGGCCGGATTTCGGGTACGGGTTTATTCCACCCGATTTGAGTAATGTTTTCTTACAGTTGAGCTGGGATATTCCTGATTGTGGGGATTGTCAACTTCGGGGCGGGTCTTGTGGGTTTGTGTCGGATTCGGGTTTCTCTGTTGGTTGCTTTCTTCCCAACGGCAATGGTAGTGAGTCCCCTTCTCTTCAACTCTTGATTCACTCATTATTTTCTACTCCCTCAATTTCTAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_87472.p1 GENE.R_Transcript_87472~~R_Transcript_87472.p1 ORF type:complete len:265 (+),score=-0.06 R_Transcript_87472:385-1179(+)
MQNLVHTTTSIIPIIFSLLIIQSTALESCAPFSCNRHRRDTIQFPFWVPRTQSNRCGYPGFNLSCDGDETLLHLKNSNPFTVRAIDYPDQLIWVTDPNRCLPKRVLELNLTKTPFVSGPSNTEYSFLNCSSAVNNNDSVFVPDGTSVVSCLSERNFTVFLTFEKGSEQKMVNEWKCKVIKRVVAPIWWPDFGYGFIPPDLSNVFLQLSWDIPDCGDCQLRGGSCGFVSDSGFSVGCFLPNGNGSESPSLQLLIHSLFSTPSISN*

Click here to download the sequence:
Link to NCBI Protein BLAST