Transcript Information: R_Transcript_87484.p1


Annotated TAIR IDAT1G69830.1
Annotated Gene Namealpha-amylase-like 3
Annotated Gene Symbol(s)ATAMY3, AMY3
Annotation TypeOrtholog
Chromosome Positionchr1:26288518-26293003 | Reverse length=887
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2948143422868
Replicate 21.9898454642897
Replicate 32.8196746714218
Condition 2: 8 Hour
Replicate 15.2812649886215
Replicate 27.0395368759288
Replicate 39.8469521666152
Condition 3: 24 Hour
Replicate 13.7512756908013
Replicate 22.6427870130321
Replicate 34.7208774814877


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_87484.p1 GENE.R_Transcript_87484~~R_Transcript_87484.p1 ORF type:complete len:918 (+),score=211.44,Alpha-amyl_C2|PF07821.8|1.8e-21,Alpha-amylase|PF00128.20|9.7e-18 R_Transcript_87484:130-2883(+)
ATGACATCAAGCGTGGCATTTGAGCCACTTTTTCACCATACTCTCCGGCAACCCACCACCAAAACCCACCGAATCAGACCCCGTAAAATTAAAGTTTTCCCCTTTTCTCTTAATAATTTCACTCCAAGTTCAAGATCCATCAAATTTGGCGGGAGCTTTTCTTACTTCAAACCCATCAAATCCTTTCCTATTACTGCTTGCTCTGCCACGGCTACTACTCTCTCCAAGAACTCTCAACACACTGAAACTATTCACAATGAGACTTTTCAGCTTTCTAGAACTCAAAAGGAGGAAGGGAAGGTGTTTATAAGGCTGGATCAGGGAAAAGATGAAGATCATTGGCAATTGAGTGTTGGATGTTCTCTTCCTGGCAACTGGGTTCTGCATTGGGGTGTGCATTATGTGGGTGATGTTGGAAGTGAGTGGGATCAACCTCCAAATGAAATGAGGCCTCCAGGTTCCATTGCAATTAAGGACTATGCTATAGAGACACCATTGAAGAAATCATCTACTTCCAAAGGTGGAGATGGTTTTCATGAAGTGACTATTGACTTCAATTGCAATAGTAAAATCGCAGCAATAAACTTCGTCTTGAAGGATGAAGAAACCGGATCGTGGTATCAACTTAAGGGGAGAGATTTTGTTGTACCTCTTGTTGATTATCATCGTGTTGGTGGCAATGTTGTTGGAGCAAAGAGGGGCATTGGCTTGTGGTCAGGGTCTTTAGGTCAGCTGTCTAACATGCTTCAGAAAGCTGAAGGACCTCAGCATAGAAGTGAAGATATTGTTCAAACATCTGCTGGATCCATTCAGGAAAACAGGCCACTTGAAGGGTTCTATGAAGAGCAGCCTATAGTAAAAGAAGTTCCTGTTTGCAATTCCCTTAGTGTTTCTGTGAGGAAATGCTCTGAGACGGCTGAGAATCTTGTCTATCTAGAAACTGATTTGCCTGGAAATATTGTAGTTCACTGGGGAGTATGCCGGGGTGGCAATAAGGAATGGGAAGTACCCATGACCCCACATCCACCAGATACTGAAGTATTCAAGAATAAGGCGGTGCGTACAAGACTGCAGAGGAAAGAGGATGGTTCTGGAGCTGAAGGATCATTTACAGTAGATAAAGAAATGACTGGATTTCCTTTTGTACTGAAGTTGAATGATGACACTTGGTTGAACAATAGGGGGAATGACTTTTTCATCCCCCTTTTGGGAACTCAGACGGGAGATGACGTTTCTGAAGAAAAAGAGATCAATGTTTCTAAGGAATTGCTGTCTGATTCTTCAGAGACAGATGAAAAGTCCCGAAAAGAAAATGGAGAAGTTCCTCATACTACATATACGGATGGAATCATCAAAGATATAAGGAATTTAGTAAATGACATTTCCTCTGAAAAGAAATGGAAAACAAAAAGTAAAGAAGCACAGGAAAATATTCTTCAAGAGATTGAGAATTTGGCAGCTGAAGCATATAGTATCTTCAGAGGCTCTACTATAACTTTCTCTGAGGAAGCTGTGGAAGAATCTGAAGAAGTAGAAACTTCAACTAAAATTAACTCTGGGACAGGTTCTGGATTTGAAATTCTTTGTCAGGGGTTCAACTGGGAGTCTCATAAATCTGGCAGATGGTATATGGAGCTCCAAGAAAAAGCCGCAGAGTTGGCGTCGCTTGGTTTTACAGTAGTTTGGTTGCCCCCACCTACTGAATCTGTATCACCTGAGGGTTACATGCCGAAAGATCTTTACAATTTAAACTCCAGATATGGTACTATTGATGAGCTGAAGACTGTTGTGAAAAGATTCCATGAATTGGGTATTAAGGTTCTTGGAGATGTTGTCTTGAATCATCGTTGTGCACACTTCAAGAATCATAATGGTGTCTGGAATATTTTTGGTGGTCGTCTTAATTGGGATGACCGAGCAGTAGTCGCTGATGACCCCCATTTCCAGGGTAGGGGCAATAAGAGTAGTGGCGATAACTTCCATGCTGCTCCAAACATTGACCATTCCCAAGATTTTGTGAGAAAGGATATTAAGGAATGGTTGTGCTGGCTGAGGAAATATATTGGGTATGATGGCTGGAGGCTTGATTTTGTTCGTGGATTTTGGGGTGGTTATGTTAAGGACTACATTGATGCCAGTGAACCCTACTTTGCTGTAGGAGAGTACTGGGATTCTCTTAGTTATACCTATGGTGAGATGGATTATGACCAGGATGCCCATAGACAAAGAATTGTGGACTGGATAAATGCTGCTGGTGGAACTGCTGGTGCATTTGATGTCACCACAAAAGGGATACTTCATTCTGTGTTGGAAAGATGTGAATATTGGCGTTTATCTGATTCAAAGGGAAAACCCCCAGGAGTGGTTGGCTGGTGGCCATCTCGTGCTGTTACCTTTATTGAGAACCATGACACCGGTTCCACCCAGGGTCATTGGAGATTTCCTGGAGGCAAGGAAATGCAAGGGTATGCTTACATTCTGACTCACCCTGGAACACCGGCAGTTTTCTATGACCACGTATTTTCACACTATCGATCAGAAATTGCTGCACTTATCTCTCTCAGAAACCGTAAGAAGATCCATTGTAGGAGCATTGTTAAGATAGCCAAAGCCGAGAGGGATGTTTATGGAGCAGTTATCGACGATAAAGTAGCTATGAAGATTGGACCTGGTCATTATGAACCGCCTAGTGGGTCTCAGCAATGGTCCGTGGCAGTTGAGGGCAAAGATTACAAAGTCTGGGAAGCATTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_87484.p1 GENE.R_Transcript_87484~~R_Transcript_87484.p1 ORF type:complete len:918 (+),score=211.44,Alpha-amyl_C2|PF07821.8|1.8e-21,Alpha-amylase|PF00128.20|9.7e-18 R_Transcript_87484:130-2883(+)
MTSSVAFEPLFHHTLRQPTTKTHRIRPRKIKVFPFSLNNFTPSSRSIKFGGSFSYFKPIKSFPITACSATATTLSKNSQHTETIHNETFQLSRTQKEEGKVFIRLDQGKDEDHWQLSVGCSLPGNWVLHWGVHYVGDVGSEWDQPPNEMRPPGSIAIKDYAIETPLKKSSTSKGGDGFHEVTIDFNCNSKIAAINFVLKDEETGSWYQLKGRDFVVPLVDYHRVGGNVVGAKRGIGLWSGSLGQLSNMLQKAEGPQHRSEDIVQTSAGSIQENRPLEGFYEEQPIVKEVPVCNSLSVSVRKCSETAENLVYLETDLPGNIVVHWGVCRGGNKEWEVPMTPHPPDTEVFKNKAVRTRLQRKEDGSGAEGSFTVDKEMTGFPFVLKLNDDTWLNNRGNDFFIPLLGTQTGDDVSEEKEINVSKELLSDSSETDEKSRKENGEVPHTTYTDGIIKDIRNLVNDISSEKKWKTKSKEAQENILQEIENLAAEAYSIFRGSTITFSEEAVEESEEVETSTKINSGTGSGFEILCQGFNWESHKSGRWYMELQEKAAELASLGFTVVWLPPPTESVSPEGYMPKDLYNLNSRYGTIDELKTVVKRFHELGIKVLGDVVLNHRCAHFKNHNGVWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRKYIGYDGWRLDFVRGFWGGYVKDYIDASEPYFAVGEYWDSLSYTYGEMDYDQDAHRQRIVDWINAAGGTAGAFDVTTKGILHSVLERCEYWRLSDSKGKPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPGGKEMQGYAYILTHPGTPAVFYDHVFSHYRSEIAALISLRNRKKIHCRSIVKIAKAERDVYGAVIDDKVAMKIGPGHYEPPSGSQQWSVAVEGKDYKVWEAL*

Click here to download the sequence:
Link to NCBI Protein BLAST