Transcript Information: R_Transcript_87593.p1


Annotated TAIR IDAT3G22670.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:8017771-8019459 | Reverse length=562
E-Value1.1E-175
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9387593665916
Replicate 21.3521767709959
Replicate 32.4996618843744
Condition 2: 8 Hour
Replicate 12.9347995553943
Replicate 23.5201388229416
Replicate 34.7733215763808
Condition 3: 24 Hour
Replicate 13.2034149620052
Replicate 22.3278359115278
Replicate 34.0329759977646


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_87593.p1 GENE.R_Transcript_87593~~R_Transcript_87593.p1 ORF type:complete len:559 (+),score=131.91,PPR_2|PF13041.2|0.045,PPR_2|PF13041.2|0.42,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|9.4e-10,PPR_2|PF13041.2|1.2e-09,PPR_2|PF13041.2|2.6e-09,PPR_2|PF13041.2|2e-11,PPR_2|PF13041.2|1e-08,PPR_2|PF13041.2|1.4e-07,PPR_2|PF13041.2|4.4e-07,PPR|PF01535.16|0.046,PPR|PF01535.16|0.26,PPR|PF01535.16|0.12,PPR|PF01535.16|3.8e-06,PPR|PF01535.16|0.011,PPR|PF01535.16|1.2e-05,PPR|PF01535.16|0.0023,PPR|PF01535.16|0.00035,PPR|PF01535.16|7,PPR|PF01535.16|1.2e-06,PPR_3|PF13812.2|0.0051,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|86,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|1.6e-05,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|0.058,PPR_3|PF13812.2|19,PPR_3|PF13812.2|4,PPR_1|PF12854.3|6.5e+02,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|36,PPR_1|PF12854.3|5.1e-08,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|6.6e-07,PPR_1|PF12854.3|0.00058,PPR_1|PF12854.3|0.00087,PPR_1|PF12854.3|0.33,PPR_1|PF12854.3|1.6e-07 R_Transcript_87593:199-1875(+)
ATGTACTCCAGTGGGAAATTTGTGAAGTTTTCTTCATTTTTTCGGGTCCAACGTGCCGCATACTTGAGTGGTAGGTTTACTTGTGTCCTGTATGATTCATTTTGTACGAGCTCTGAATCGGAAAATGTGGTTGATTCCCCTCTTGTTGCCGAGTCACCAGAACTTCCTAGTTGGGTTAAGTTCTGTGAAAATGAGAATCCTTCTGCTGTAGAATCGGATGATGAGTTTGTATTGCCGAAAGTTGCTAAATGGGCTGATACTAAAAAGCTAAATGATGGTCATTGGAAGCATGTCAAGCATGTAGCAGGTGAAATAGTGGATAGTGATGTCAATAGGTTGACAAAGGTGTTGAAGGGGAAGTTTGACTCACTTGATGCTGTTTACAATGCGGTTGCTATGTGTGGTCCAATTGATTTATCTGAGAACTTGGTGGACCAAATTTTGCGGAGATTCAGTAATGATTGGATATCTGCACTTGGCTTTTTCAAATGGGCGAAAAATCAACCAGGGTTTGAACATATAGTGAATTGCTATGATCTTATGGTCGATATATTGGGTAGGTCGGGGAATTTTGAATTAATGTGGGAGTTGGTTGAGGAGATGGATAAATTGGGGGAATTTGTTTCTGTTTCCACGATGACAAAGGTCATGAGAAGGCTTTCACGGGCTAAAAGATATGATGAAGCAATAGAAGCATTTGAGAAATTTGAGCGGTTGGGGGTGACCAAAGACACTGCAGGAATGAACACACTAATGGATAGCTTGGTGAAAGAAAACAGTGTTGAGCATGCCCAAAAGGTGTTTCTGGAATTTAAGGATAGAATACCTCTAAATTCTCGCACCTTCAATATCTTGATTCATGGTTGGTGCAAGTTCAAGAAGTATAATGAAGCAAGGGCAGTTATGGATCAGATGGAGAAGCATGGATGTTGCCCTGATGAGTTATCGTATACTCCCTTTGTTGAGTATTATTGCCGTGAGAAGGATTTTCGAAAGGTTGATGGGATTTTGGATGAGATGCAGCAAAAAGGTTGCCCTCCTAATGTAGTGACTTATACTATTGTTATGGTTGCTTTGGGAAAAGCCAAGGAGATAAATGCAGCTTTGGAAATTTGGGAGAAGATGAAGAGAAGTGGTTGTGCTCCTGATGCCAACTTTTGTAGTGCCTTGATTTTCATCCTGAGCAAATCAGGGAGGTTTAAGGATGCATGTGATCTGTTCAGGGACATGTCAGAGGAGAATGTTGCCCCTAATCTTTTGACATACAATACCATGATAACTGCTGCTTGTATGCATTCCAGAGAAGAATATTCTCTTCAGTTACTTCAAGAAATGGAGGAGAAATCTTGCATGCCTGATATCAAAACCTATACACCATTGCTGAAAATGTGTTGTCAGAAGAAAAGAATGAAGGTGCTCAACTACCTGTTAGATGACATGTTTCGGAAAAATGTTAGTATTGATCTTGGAACATATTCTCTTCTGGTGAATGGCCTATGCAAGAATGGCAAACTAGAGCATGCATGTTCATTTTTTGAACAGATTGTGTCAAAGGGAATGCTTCCTTGGGATAGCACTTATAAATTGTTGTTGCAAAAGCTTGAGGAGAAAAGCATGGAAAAAGCAAAGCAACAGATAGAAAATTTAATGTCAAAAGCAAAAATGTTATCTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_87593.p1 GENE.R_Transcript_87593~~R_Transcript_87593.p1 ORF type:complete len:559 (+),score=131.91,PPR_2|PF13041.2|0.045,PPR_2|PF13041.2|0.42,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|9.4e-10,PPR_2|PF13041.2|1.2e-09,PPR_2|PF13041.2|2.6e-09,PPR_2|PF13041.2|2e-11,PPR_2|PF13041.2|1e-08,PPR_2|PF13041.2|1.4e-07,PPR_2|PF13041.2|4.4e-07,PPR|PF01535.16|0.046,PPR|PF01535.16|0.26,PPR|PF01535.16|0.12,PPR|PF01535.16|3.8e-06,PPR|PF01535.16|0.011,PPR|PF01535.16|1.2e-05,PPR|PF01535.16|0.0023,PPR|PF01535.16|0.00035,PPR|PF01535.16|7,PPR|PF01535.16|1.2e-06,PPR_3|PF13812.2|0.0051,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|86,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|1.6e-05,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|0.058,PPR_3|PF13812.2|19,PPR_3|PF13812.2|4,PPR_1|PF12854.3|6.5e+02,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|36,PPR_1|PF12854.3|5.1e-08,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|6.6e-07,PPR_1|PF12854.3|0.00058,PPR_1|PF12854.3|0.00087,PPR_1|PF12854.3|0.33,PPR_1|PF12854.3|1.6e-07 R_Transcript_87593:199-1875(+)
MYSSGKFVKFSSFFRVQRAAYLSGRFTCVLYDSFCTSSESENVVDSPLVAESPELPSWVKFCENENPSAVESDDEFVLPKVAKWADTKKLNDGHWKHVKHVAGEIVDSDVNRLTKVLKGKFDSLDAVYNAVAMCGPIDLSENLVDQILRRFSNDWISALGFFKWAKNQPGFEHIVNCYDLMVDILGRSGNFELMWELVEEMDKLGEFVSVSTMTKVMRRLSRAKRYDEAIEAFEKFERLGVTKDTAGMNTLMDSLVKENSVEHAQKVFLEFKDRIPLNSRTFNILIHGWCKFKKYNEARAVMDQMEKHGCCPDELSYTPFVEYYCREKDFRKVDGILDEMQQKGCPPNVVTYTIVMVALGKAKEINAALEIWEKMKRSGCAPDANFCSALIFILSKSGRFKDACDLFRDMSEENVAPNLLTYNTMITAACMHSREEYSLQLLQEMEEKSCMPDIKTYTPLLKMCCQKKRMKVLNYLLDDMFRKNVSIDLGTYSLLVNGLCKNGKLEHACSFFEQIVSKGMLPWDSTYKLLLQKLEEKSMEKAKQQIENLMSKAKMLSS*

Click here to download the sequence:
Link to NCBI Protein BLAST