Transcript Information: R_Transcript_87832.p1


Annotated TAIR IDAT5G22330.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)ATTIP49A, RIN1
Annotation TypeOrtholog
Chromosome Positionchr5:7391026-7394071 | Reverse length=458
E-Value1.4E-294
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.950498035994
Replicate 241.07171046346
Replicate 344.20598483468
Condition 2: 8 Hour
Replicate 136.56770620411
Replicate 239.719987481053
Replicate 346.573211460203
Condition 3: 24 Hour
Replicate 154.524792165797
Replicate 248.705363383358
Replicate 356.399239050667


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_87832.p1 GENE.R_Transcript_87832~~R_Transcript_87832.p1 ORF type:complete len:456 (+),score=110.58,TIP49|PF06068.9|1.4e-186,AAA|PF00004.25|1.2e-07,AAA|PF00004.25|1.1,RuvB_N|PF05496.8|1.2e-07,RuvB_N|PF05496.8|1.2,AAA_22|PF13401.2|0.14,AAA_22|PF13401.2|0.06 R_Transcript_87832:230-1597(+)
ATGAGGATAGAAGAGGTGCAGTCTACTACAAAGAAGCAGCGTATCGCCACTCACACCCACATCAAAGGCCTCGGTCTCGATGCCAATGGGAATGCGGTACCCCTGGCTGCTGGCTTTGTGGGTCAGGCTCAGGCAAGAGAAGCAGCTGGACTCGTAGTCGATATGATTCGCCAAAAGAAAATGGCTGGTCGAGCCTTGCTACTTGCTGGTCCTCCTGGTACTGGCAAGACCGCTTTGGCTCTTGGTATTGCTCAGGAGCTTGGGAGCAAGGTTCCCTTTTGCCCTATGGTTGGTTCAGAAGTTTACTCCTCAGAGGTAAAGAAGACTGAAGTTCTTATGGAAAATTTTAGAAGAGCTATTGGTTTACGTATCAAGGAAAACAAGGAAGTTTATGAAGGAGAGGTGACTGAGCTCTCCCCAGAAGAAACTGAGAGTGCTACTGGTGGATACGGTAAGAGTATTAGTCATGTAATCATCGGCTTAAAAACTGTCAAAGGAACCAAGCAACTGAAGTTAGATCCAACTATATATGATGCATTGATAAAGGAAAAGGTGGCTGTTGGAGATGTTATATATATTGAATCAAATAGTGGAGCAGTGAAAAGGGTGGGACGAAGTGATGCATTTGCAACAGAATTTGACCTTGAGGCTGAGGAATATGTTCCACTTCCCAAAGGAGAGGTTCATAAGAAGAAAGAGATAGTACAGGATGTGACTCTGCATGATCTGGATGCTGCAAATGCTAGGCCTCAAGGTGGACAGGACATATTGTCTCTTATGGGTCAGATGATGAAGCCAAGAAAAACTGAGATTACCGATAAGTTACGGCAAGAAATAAACAAGGTTGTTAATCGTTATGTTGATGAAGGCGTTGCAGAGCTTGTGCCTGGAGTCTTATTTATTGATGAGGTTCATATGCTGGATATCGAGTGCTTTTCATACTTGAATCGAGCTCTAGAGAGCTCTCTATCCCCCATAGTCATCTTTGCAACAAATAGAGGAGTATGTGATGTGAGAGGAACTACAATGAAGAGTCCTCATGGAATACCTGTGGACCTGTTAGACCGACTATTGATAATCCGAACGGAAACTTATGGCCCAGCTGAGATGATACAGATTTTAGCAATTCGTGCTCAGGTTGAGGAATCGTTAGTAGATGAAGAAGGGCTTGCTTATATAGGGGAGATTGGCCAGCGAGCATCTTTGAGGCATGCAGTTCAGCTGTTATCACCTGCGAGTGTCATTGCACGAATGAATGGCCGAGAAAGCATCTGCAAGGCTGATATTGAGGAAGCCAATTCATTATATCTGGATGCCAAGTCTTCAGCAAGGCTCCTGCAGGAGCAGCAAGACAGATACATTTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_87832.p1 GENE.R_Transcript_87832~~R_Transcript_87832.p1 ORF type:complete len:456 (+),score=110.58,TIP49|PF06068.9|1.4e-186,AAA|PF00004.25|1.2e-07,AAA|PF00004.25|1.1,RuvB_N|PF05496.8|1.2e-07,RuvB_N|PF05496.8|1.2,AAA_22|PF13401.2|0.14,AAA_22|PF13401.2|0.06 R_Transcript_87832:230-1597(+)
MRIEEVQSTTKKQRIATHTHIKGLGLDANGNAVPLAAGFVGQAQAREAAGLVVDMIRQKKMAGRALLLAGPPGTGKTALALGIAQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELSPEETESATGGYGKSISHVIIGLKTVKGTKQLKLDPTIYDALIKEKVAVGDVIYIESNSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYVDEGVAELVPGVLFIDEVHMLDIECFSYLNRALESSLSPIVIFATNRGVCDVRGTTMKSPHGIPVDLLDRLLIIRTETYGPAEMIQILAIRAQVEESLVDEEGLAYIGEIGQRASLRHAVQLLSPASVIARMNGRESICKADIEEANSLYLDAKSSARLLQEQQDRYIS*

Click here to download the sequence:
Link to NCBI Protein BLAST