Transcript Information: R_Transcript_87929.p2


Annotated TAIR IDAT3G52590.1
Annotated Gene Nameubiquitin extension protein 1
Annotated Gene Symbol(s)UBQ1, EMB2167, ERD16, HAP4
Annotation TypeOrtholog
Chromosome Positionchr3:19505668-19506681 | Forward length=128
E-Value3.1E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.99047074948086
Replicate 21.3020961498479
Replicate 31.5981444834525
Condition 2: 8 Hour
Replicate 10
Replicate 20.69336067724606
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_87929.p2 GENE.R_Transcript_87929~~R_Transcript_87929.p2 ORF type:complete len:129 (+),score=24.79,ubiquitin|PF00240.19|1.3e-32,Ribosomal_L40e|PF01020.13|3e-23,Rad60-SLD|PF11976.4|2e-16 R_Transcript_87929:22-408(+)
ATGCAAATCTTCGTTAAGACTCTTACCGGAAAGACCATTACCCTTGAAGTTGAAGGATCTGATTCCATTCAAAATGTCAAGCAAAAAATCCAAGATAAGGAAGGAATTCCTCCAGATCAACAAAGATTGATCTTTGCTGGAAAGCAATTGGAAGATAACAGAACCCTTGCAGACTACAACATCCAAAAGGAATCCACCCTTCACTTGGTGTTGAGATTGAGAGGAGGAGTCATTGAACCTACCATGGCAGCTATCGCAAGAGCAAAAAGAACCAACAAGCTCATCTGCCGTGTCTGCTATGCAAGAAACTCTGTTCGTGCAACCAACTGCAGAAAGAAAAAGTGCGGACATTCTAACCAACTTAGACCAAAGAAGAAACTTAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_87929.p2 GENE.R_Transcript_87929~~R_Transcript_87929.p2 ORF type:complete len:129 (+),score=24.79,ubiquitin|PF00240.19|1.3e-32,Ribosomal_L40e|PF01020.13|3e-23,Rad60-SLD|PF11976.4|2e-16 R_Transcript_87929:22-408(+)
MQIFVKTLTGKTITLEVEGSDSIQNVKQKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGVIEPTMAAIARAKRTNKLICRVCYARNSVRATNCRKKKCGHSNQLRPKKKLK*

Click here to download the sequence:
Link to NCBI Protein BLAST