Transcript Information: R_Transcript_87951.p1


Annotated TAIR IDAT1G49040.1
Annotated Gene Namestomatal cytokinesis defective / SCD1 protein (SCD1)
Annotated Gene Symbol(s)SCD1
Annotation TypeOrtholog
Chromosome Positionchr1:18139419-18148826 | Reverse length=1187
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.708844369344
Replicate 29.2908629342119
Replicate 311.377013006089
Condition 2: 8 Hour
Replicate 19.3658433423213
Replicate 210.956832102181
Replicate 314.975078761819
Condition 3: 24 Hour
Replicate 114.023393914923
Replicate 212.001736712956
Replicate 313.150862566044


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_87951.p1 GENE.R_Transcript_87951~~R_Transcript_87951.p1 ORF type:complete len:1200 (+),score=228.02,DENN|PF02141.17|2.3e-47,WD40|PF00400.28|0.00043,WD40|PF00400.28|0.00082,WD40|PF00400.28|0.00011,WD40|PF00400.28|59,WD40|PF00400.28|0.0063,WD40|PF00400.28|0.089,WD40|PF00400.28|2.2e+03,WD40|PF00400.28|15,uDENN|PF03456.14|8.1e-09,dDENN|PF03455.15|1.3e-05 R_Transcript_87951:320-3919(+)
ATGGCCCCCATATTCGAGTACTTTATAGTGTGTGGGATCGGGCCAGAGATTCGAACATTGGATGAAAACAAGGGGTTTTATGGCATGAGTTACAGATACTTGCCCTCGCTTTTGGATCAGTTTCCCCCTCCTAATCACTCCCTCTATCCTCCACCTCCTCCTCAGCTTTCTACTTGTGTTTTGCCTGCTGGAGTGGAATTCTATGCATCAGGATTTAATTGCAATGATCACTTCACACATCCTCGGACCTATCCTATTGTCTTAACAGAGGGTGATGGATCCAAAATCTATGTTTGTTGCATTGCTTTTCGGGATCCAGTTGATGAGGATATTGCTGAAGCATATCGTATTCCCTCCAATTCATATGCGGACAAGTGCATCTGTCTTGTTTCACGTTTGCCCAGTTTTCATGTGCTACGTAGTGCTCTGGAGGAGATATTTGCTCTTTGTTTCTCTCCTGAAGGAAGTTGCAAGCCTTTATGGAATGTCATATCCTCTATGGTTTCCAATGTTCCCCTGCCTACGCCAGGAAAAGATCGAGTTTTATTTGCTATTGAGAATTGCTTATTATCAGTTGAGGCTCCACCGAAAAATGGGCTACCTCATGCTGATATATCCTTTCAGCCATTGGTGCAGTGCTTGGATATTGACAACTTGCTTAAGCTATTCACTGCTGTACTACTTGAAAGGAGAATTCTGCTTCGGTCAAACAAGTATTCACTTTTGACACTTGTATCTGAGGCCATTTGCCATCTGATCTATCCATTTAGGTGGCAGCATGTGTACATTCCGTTACTATTTTTCAGCGGAGTGGATTATATTGATGCTCCGACACCATACATGATGGGTCTTCATTCTGGTGTTGATACCTCAGGCCTTTCAATGGATGGTGTTGTTATTGTGGACCTTGAGTGCAATCGCATCACCACCTCAGAAGATATACCCCCTATCCCAGAGCCAGAGCTGAGTTCTTTACGTAGTGAGATCTTAAAATTACTATGTCCTAACGTTGTTGGCATAGACCAGGTGAAGGTTGGCATTCAAACATCCTCTGAGCAGGGCCTCAAATTTGCTACAAAACCTTGGTCAGAAGAGCATGACTTTCAACTAAGGCTGGTATTTCTGAAGTTTTTTGCATCTATTTTATCTGGATATCGGAACTTTATAGAAAATACTGCAACCAATGTGTTTAACACCCAAGCGTTCTTGAAGAAGCGTTCTCGGTTGACTACTCAACCCCCAGATCCCATGATAACACAATTTTTGGAGACTCAAGGTTTCTTAGACTTTCTTGAAAGAGGCATAGGTTTTGATGACAACAACCACAATCTTCTCGATAAGTTGCAAGATGCGCTTGGGAGAGGGCAGGACCCTATGTCAATATTACCAGAACCTCTTTTAGAGCCTGAAATTATTACAATATCAGATCATGTTGACAAAGAAGTTACTGCTGCCAGATATGTGTATGACAGGTTTCCTTCAAATATGAGAACAGAGGAGCACGAAGAGAAGAGGAAGCAGATTCTTGCTTCAGTTAGTGGAGCCCTTGATAACTCTACAAAACTTACACTAGATCGTTCTGAAAGTCTCAGTCCAAGGGAACGCGCTGCAGAGCGTGAGCGCATGGTTTTGGACATCAAAGTGAAGCTGCAGGGGTTGTGGTTACGTCTTCTGAAATTAGGGGCAACAGATGATCCCTTGTCCTCTTTTGAATATGGAACTATACTTGCTCTCATTGAATCTGATGCGGATGGTATTGGTGGTAGTGGTTTTGTTGAATGTATAAGAGAACATATAAACACTGGTTGGACTTGTCAATTGACTGAAGAACAGTTTATTGCTGTCAAAGAACTGTTGAAAACTGCGATTACTCTAGCAAATTCCCGGAATGACATGTCAACAATTAGGGATGCACTTGAAGTCTCCGCTGAAATATACAAGAAAGATGTCAACAATATTTCAGATTGTGTCCAACGCCATATTGTTTCCCTTCCCATTTGGGAGGAGTTACGATTCTGGGAAGGATATTTTGAGCATCTTATGGAGCAGACCTCCAACAAGTCATCCAATTATGCCACCCTAGTTATGACACAGCTAATTGTAGTTGCATCACATATGGCTGGACTGGGACTTCCTGATGTTGATGCTTGGCACATTATTGAGACCATAGCAGAGAAAAATAATATTGGGTATAAACAATTTATACAATTAAGAGGCTATTTATCACATATCCACCAACTACGCTTTGGATACTGGGGAATATCTGCTGCAAAAGCTCAATCCTTGGCATCTTATGGATTGCAATCTCCTCATCTGCAAGATGCTGTAAGTGACAGTCAACAACCTGCAGAGGCATCTAGTGTTGGAAGGAGCTGGGTCCAAAGCATGTTTAGCAGGGATACGTCATTAAGGGGGCATAGTTTCGCTCGTATGCATAGTGGACTATCAGCTGCGAATGAGAATGGAGCACCTGGTAAACAAGATCTGGCAAATGCAGGACAGAAGAGACTTCAGACAAATGTGCGTGTCCTTAGGGGCCACAGCGGTGCCATTACTGCTTTACATTGTGTCACAAAAAAGGAGGTGTGGGATCTTGTTAGTGACCGTGAGGATGCAGGTTTCTTCATTAGTGGAAGCACAGATTGCCTGGTTAAGATATGGGATCCAAGTCTTCGTGGTTCCGAGCTTCGGGCAACATTGCAAGGTCATACTGGGCCCGTACGTGCAATAAGTTCTGATCGAGGGAAAATTGTCTCGGGATCCGATGATCAGTCAATCTTGGTATGGGATAAGCAAATGTACCAGCTTCTAGAAGAGCTGAAAGGACATAATGCTTCAGTCAGCTGTGTGCGAATGCTTTCAGGAGAACGTGTTCTTACTTCTGCTCATGATGGAACCTTAAAAATGTGGGATGTGAGGACTGATACTTGTGTGGCAACAGTTGGTCGTTGCTCAGCTGCAATTCTTTGTATGGATTATGATGATTCCACCGGAATTTTGGCTGCTGCTGGTAGGGATTCAGTTGCATACTTATGGGACATCCGTGCTGGTAGACAAATACACAAGCTCTTGGGACATACAAAATGGATCAGGTCCATCAGAATGGTCGGAGATACACTGATAACTGGAAGTGATGATTGGACAGCAAGGGTGTGGTCGGCTTCCCGTGGTACATGTGATGCTGTTTTAGCATGCCATTCAGGTCCTGTTCAATGTGTCGAGTATTCAAAATTGGAGAAGGGAATAATCACTGGCTCAACAGATGGTCTGCTACGATTCTGGGAAAATGCCGAGGGAGGTATAAGATGTGTCAAGAACGTTACTTTACATTCTTCACCTATATTATCCATCAATGCCAGTGAGCATTGGCTGGGGATCGGAGCAGCAGATAATTCCATGTCCCTTTTTCATCGCCCACAAGAAAGACTTGGTGGGTTCTCTAGCTCTGGCTCTAAAGCTACCGGTTGGCAGCTTTACAGGACACCCCAGAAATCAGCTGCAGTGGTGAGATGTGTGGCTGCCGATCTTGAGAGAAAGAGGATATGCAGTGGTGGACGTAATGGACTGCTCCGCTTATGGGATGCTACTATCAACATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_87951.p1 GENE.R_Transcript_87951~~R_Transcript_87951.p1 ORF type:complete len:1200 (+),score=228.02,DENN|PF02141.17|2.3e-47,WD40|PF00400.28|0.00043,WD40|PF00400.28|0.00082,WD40|PF00400.28|0.00011,WD40|PF00400.28|59,WD40|PF00400.28|0.0063,WD40|PF00400.28|0.089,WD40|PF00400.28|2.2e+03,WD40|PF00400.28|15,uDENN|PF03456.14|8.1e-09,dDENN|PF03455.15|1.3e-05 R_Transcript_87951:320-3919(+)
MAPIFEYFIVCGIGPEIRTLDENKGFYGMSYRYLPSLLDQFPPPNHSLYPPPPPQLSTCVLPAGVEFYASGFNCNDHFTHPRTYPIVLTEGDGSKIYVCCIAFRDPVDEDIAEAYRIPSNSYADKCICLVSRLPSFHVLRSALEEIFALCFSPEGSCKPLWNVISSMVSNVPLPTPGKDRVLFAIENCLLSVEAPPKNGLPHADISFQPLVQCLDIDNLLKLFTAVLLERRILLRSNKYSLLTLVSEAICHLIYPFRWQHVYIPLLFFSGVDYIDAPTPYMMGLHSGVDTSGLSMDGVVIVDLECNRITTSEDIPPIPEPELSSLRSEILKLLCPNVVGIDQVKVGIQTSSEQGLKFATKPWSEEHDFQLRLVFLKFFASILSGYRNFIENTATNVFNTQAFLKKRSRLTTQPPDPMITQFLETQGFLDFLERGIGFDDNNHNLLDKLQDALGRGQDPMSILPEPLLEPEIITISDHVDKEVTAARYVYDRFPSNMRTEEHEEKRKQILASVSGALDNSTKLTLDRSESLSPRERAAERERMVLDIKVKLQGLWLRLLKLGATDDPLSSFEYGTILALIESDADGIGGSGFVECIREHINTGWTCQLTEEQFIAVKELLKTAITLANSRNDMSTIRDALEVSAEIYKKDVNNISDCVQRHIVSLPIWEELRFWEGYFEHLMEQTSNKSSNYATLVMTQLIVVASHMAGLGLPDVDAWHIIETIAEKNNIGYKQFIQLRGYLSHIHQLRFGYWGISAAKAQSLASYGLQSPHLQDAVSDSQQPAEASSVGRSWVQSMFSRDTSLRGHSFARMHSGLSAANENGAPGKQDLANAGQKRLQTNVRVLRGHSGAITALHCVTKKEVWDLVSDREDAGFFISGSTDCLVKIWDPSLRGSELRATLQGHTGPVRAISSDRGKIVSGSDDQSILVWDKQMYQLLEELKGHNASVSCVRMLSGERVLTSAHDGTLKMWDVRTDTCVATVGRCSAAILCMDYDDSTGILAAAGRDSVAYLWDIRAGRQIHKLLGHTKWIRSIRMVGDTLITGSDDWTARVWSASRGTCDAVLACHSGPVQCVEYSKLEKGIITGSTDGLLRFWENAEGGIRCVKNVTLHSSPILSINASEHWLGIGAADNSMSLFHRPQERLGGFSSSGSKATGWQLYRTPQKSAAVVRCVAADLERKRICSGGRNGLLRLWDATINI*

Click here to download the sequence:
Link to NCBI Protein BLAST