Transcript Information: R_Transcript_87965.p1


Annotated TAIR IDAT3G19360.1
Annotated Gene NameZinc finger (CCCH-type) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6707544-6708864 | Forward length=386
E-Value2.8E-88
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.0713960291097
Replicate 27.0392221048861
Replicate 36.0908088405955
Condition 2: 8 Hour
Replicate 15.3076296850965
Replicate 25.0408924381863
Replicate 37.6068888438038
Condition 3: 24 Hour
Replicate 17.8295411932632
Replicate 27.9041968278369
Replicate 37.7808892384057


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_87965.p1 GENE.R_Transcript_87965~~R_Transcript_87965.p1 ORF type:complete len:346 (+),score=72.92,zf-CCCH|PF00642.20|2.3e-07,zf-CCCH|PF00642.20|1.9e-06,zf-CCCH|PF00642.20|3e-11,Torus|PF16131.1|0.029,Torus|PF16131.1|0.34,Torus|PF16131.1|1.6 R_Transcript_87965:484-1521(+)
ATGAGTTTCTCTGATGCATCAACACCATTTATGCCATACCCAAATGGGGGTTTAGATTCTATGGGAATGTGGTCACAACAATATTCAATTACAACTACAAATGAACAACCTGAAATAACTAGCCAATTTGACCCTCATGCCCCTCCTCCAATGAAAAGAGGCAAGAGTGGTTCTGATGATACCCAAGGTGGTAATCACAATCGAAGAACCCCTCAAAACAACAACCTTCCTGTGAATCAGCCCATTGGAAAGATCTTCTTTAAGACGCGATTATGCGCCAAGTTTAGGATGGGTCAATGTAGGAATGGTGAGAATTGTAACTTTGCTCATGGTGAGGAAGACATGAGGAAGCCTCCTCCTAACTGGCAAGAGCTTGTTGCTGGCCGTACGACCGATGATCGAGGGAATGGGAATGGGAATTGGGAGGATGATGATAGGTTTATTATTAGAATGAAACTTTGTAAGAAGTATTATAATGGGGAAGAGTGCCCTTACGGTGATAGGTGCAACTTTCTTCATAAGGAGCCTGCCAAGTTTCGTGATGGTCCATCTAGGTTTAGAGACAATTCCAGGGAGAGTTCGGCTATTAGCATTGGCACTACCGGACCTCCTATGGTGCTGCCAAGTGCACCTGATCAGTATGATGTTAATAAGATGGTGAATGGCGGTGTTGATTTTTCACGGGGAAACGTGAGGCCTGTTTATTGGAAAACTAGGCTTTGTACCAAGTTTGAGATGACGGGTCAGTGCCAGTATGGTGACAACTGCCATTTTGCTCATGGGCAAGCAGAGTTGATGTTGCCTGGTGGTCGTCCCACTGAAGGCGAGCCAGTAGTTGCGATGTCTGCCCCTCCTAAACCTGCACCTCTACTCGCTAACGAGCCTATTCCAGCTAAGACCGATGCAGGACCTTTAAGCCAAGAAGGTCAAGGGAAGAAGTGTCTCTTGAAGTGGAAAGGGACCAAGAAGATCAACCGCATATATGGGGATTGGATCGATGATTTGCCGCTCAAATTGCCTAATGAGGTGGAGAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_87965.p1 GENE.R_Transcript_87965~~R_Transcript_87965.p1 ORF type:complete len:346 (+),score=72.92,zf-CCCH|PF00642.20|2.3e-07,zf-CCCH|PF00642.20|1.9e-06,zf-CCCH|PF00642.20|3e-11,Torus|PF16131.1|0.029,Torus|PF16131.1|0.34,Torus|PF16131.1|1.6 R_Transcript_87965:484-1521(+)
MSFSDASTPFMPYPNGGLDSMGMWSQQYSITTTNEQPEITSQFDPHAPPPMKRGKSGSDDTQGGNHNRRTPQNNNLPVNQPIGKIFFKTRLCAKFRMGQCRNGENCNFAHGEEDMRKPPPNWQELVAGRTTDDRGNGNGNWEDDDRFIIRMKLCKKYYNGEECPYGDRCNFLHKEPAKFRDGPSRFRDNSRESSAISIGTTGPPMVLPSAPDQYDVNKMVNGGVDFSRGNVRPVYWKTRLCTKFEMTGQCQYGDNCHFAHGQAELMLPGGRPTEGEPVVAMSAPPKPAPLLANEPIPAKTDAGPLSQEGQGKKCLLKWKGTKKINRIYGDWIDDLPLKLPNEVES*

Click here to download the sequence:
Link to NCBI Protein BLAST