Transcript Information: R_Transcript_87973.p1


Annotated TAIR IDAT3G20250.1
Annotated Gene Namepumilio 5
Annotated Gene Symbol(s)APUM5, PUM5
Annotation TypeHomolog
Chromosome Positionchr3:7059098-7062660 | Reverse length=961
E-Value2E-167
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.329649929358
Replicate 26.3461486788811
Replicate 37.2918553762672
Condition 2: 8 Hour
Replicate 15.2226014196161
Replicate 28.0288268132874
Replicate 37.8404063022679
Condition 3: 24 Hour
Replicate 16.2992482854151
Replicate 24.7987326417869
Replicate 37.4601179961772


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_87973.p1 GENE.R_Transcript_87973~~R_Transcript_87973.p1 ORF type:complete len:933 (+),score=188.36,PUF|PF00806.15|1.9e-06,PUF|PF00806.15|9e-07,PUF|PF00806.15|0.00096,PUF|PF00806.15|8.1e-05,PUF|PF00806.15|3e-08,PUF|PF00806.15|5.4e-06,PUF|PF00806.15|1.1e-06,PUF|PF00806.15|4.3e-05 R_Transcript_87973:305-3103(+)
ATGGCAACTGAGAATCCCATTAGGATGTTAGAGGATGATGGGTCCAAAAAGTGGCCATCCACTGTGGATCCTGCAATTATTGCATCGGCTTTCAGTAGTATTGCTGGTTGTGAAGGCTTTGCAAAAGTTTTAAATGAATGTAATGTCCTAAGAGAACAAACTCGTGCAGTACCTCATAGAAGTGGTAGTGCTCCACCAACTATCGAGGGCTCTATCGCTTCCCTTCAGGCTTTTATAGATCAGAAGAACTCAACATTGACTGATCCTAGCAGTGAGCTTTTGGATGGTGAGTCTGAGGAACAATTGAGGATGGACCCTGGATACATTGCATATTACTATGCCAATGTTAACTTAAACCCAAGGCTTCCTCCTCCTATTCTCTCACGTGAAAACCGTCATTTGGTGCGACTTATGGGTCATTTTGGAAGCAAAATGTTGACTTCGGAAAAGGAAGCTTTTCTGTCTCCACATACGGAGGAACCTGAAGAAGATATGTCTGCTGAACAAAGCTCGGGTGATCAGCTGAAAAGGTCTGTGACTGAACAAAAGAAGGCGTCTTCAGCTTTTCATAGTAGAGGTCAGGTTGATCTCAAGCAGGGAGAATTCCCTGAGGTTCCATCTCCTGCACCTGCTAAATTTGTCGAAGGAGAATTTGGTCATGACAGTCGCACAATTTCAACTGATCAGGATGCATCATGCTCAGGCGCTGTTGTGCCTGAGGATGCTATTACTGTTAATTATAATGGCGTTGCTTCTGTCTCTTGTAATGAGTCTCCTGCAATCACTTTAGAGGATAATGCATCTACCCAGAGTAATTTCGGATCAGATATCTCTGTAGTAGAGTCAAGAATGAAATCCTTGAATGTGTCTGGTGGTTTAGTCATGGAGGATCACCAAAGGAGACATGAGAATGTCAACTCAAGTGATAAGAATAGGCTTCCTTGTCACCCTTTACAAAGGACAATGAATCAGGTTCCTGGATTTCAAGGTCATGTTATTCACCAAGGAATGCCTGGTTTACAGGATGTACAGCCATTCTTGCATAACCCAGCACCAGCACCACCACTGTATGCAGCAACAGCCGCCTTTTTGAATTCAGGGTGTCCTTTGTACCCAGGTCTACAGCCACCAGGTTTCTTTCATCCACGATTTAGTGGATTTAGTCCTAGTTCTGTTTTTCATCCTGCATATTATGGTGGGTATCTTCCAAATAGTGCATTTCCAGTGCCAAATGATGCTTATTCTGCACTGGGCTTTTCAAAGCAACCCATAGAGGCAACAAGTGAAATAAATCCCTATACAAGTCAAAGACTGTTGCGACCTTCTTTTAGCAGTCCTCTTCAAGTACAATTCTTGCAGCAACCCTTTGACAATGCAAGGAGGAGCATGGTCCATGGTCAATTGACTGGTAGAAATGGAGCTCAAGGCCAAATTGATGTTCGTGCACCACGAAAGGATTCTGATGCATTTTCCGTGATAAGTGATAAAGATCTGTGTCATCCTGCCCCTGGAAATTTGAGCATTTCTGCTCAGGCAACTGAGAGCCGTGTAAACTACTATGGGCATCCTCCTACATTAGGCATCTCACATTTTCCTGCTCCTTGCCCTGTACTTTTACCTGCGTCTCCAATGCCAGAAAGTAATCATCCTGGACCGGGAAATGACCTGATTGCTTCACAAAATTCTCCTAAAAATGTTGTTGCGTGTTCTGTGGGATCAGGACATAGAGGATCTGACAGTTCTGATGATTCCAAAAGGAATTCTTTTCTTGAATTGCTCAAGTCATGCAATTCCAGGAAGCTTGAATTGTCTGATATTTCAGGGCAGATTGTTGAGTTCAGCACTGATCAACATGGTAGTCGGTTCATTCAACAGAAGCTGGAATATTGCAGCATTGATGAGAAGGAATCTGTTTTTAGAGAGGTTTTTCCTCATGCTTCAAAATTAATGATTGATGTATTTGGAAATTATGTTATTCAAAAGTTCTTTGAACACGGAACTGCTGAACATAGGAAAAAGCTTGGTGAACAACTTACTGGACAGATAGTGACCTTAAGTTTGCAAATGTATGGCTGCCGTGTAATCCAAAAGGCTCTTATTGTGATTGAGCTTAATCAGAAAGTAAAGCTTGTGCAAGAGCTTCATGGTCATGTTATGAGATGTGTGTACGACCAGAATGGAAATCACGTGATACAAAAATGTATCGAATCTGTTCCCATAGAGAACATTGGGTTCATTATTTCTTCTTTTATTGGTGAAGTTGCGACACTATCTTCTCATCCCTATGGTTGTCGTGTCATTCAGAGAGTTCTGGAGCATTGTTCAGATGAGCAGATAATTCTGCGAATAATTGATGAGATCCTTGAATCTGCTTGTAGTCTCGCTCAAGACCCGTATGGAAATTATGTTACGCAGCATGTGCTTGAGACGGGGAAGGCCCAGCAAAGAAGCCAAATTATCAGCAAGTTGGTTGGTAGATTTGTACAGTTGAGTCAGCATAAGTTTGCATCAAATGTAGTCGAGAAATGCTTGAAATACGGTGATGCTTCAGAGCGAAATCTCATAATCGAAGAAATGGTTGTTCAGTCTGACAATGTTTTGTTGATGATGATGAAGGACCAATTTGCAAATTATGTACTCCAGAAGATCTTCGACATAGGCAGCGATAAACAGAGGGGCATACTCCTCAGTTGTATACGCTCTCATCTTCCTACTCTGAAAAAATTCCCTTACGCGAAGCACATTGTAGCTCGCTACGAGCAATTATCAGAAGTCTCGGTACAGGAGGATCAGAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_87973.p1 GENE.R_Transcript_87973~~R_Transcript_87973.p1 ORF type:complete len:933 (+),score=188.36,PUF|PF00806.15|1.9e-06,PUF|PF00806.15|9e-07,PUF|PF00806.15|0.00096,PUF|PF00806.15|8.1e-05,PUF|PF00806.15|3e-08,PUF|PF00806.15|5.4e-06,PUF|PF00806.15|1.1e-06,PUF|PF00806.15|4.3e-05 R_Transcript_87973:305-3103(+)
MATENPIRMLEDDGSKKWPSTVDPAIIASAFSSIAGCEGFAKVLNECNVLREQTRAVPHRSGSAPPTIEGSIASLQAFIDQKNSTLTDPSSELLDGESEEQLRMDPGYIAYYYANVNLNPRLPPPILSRENRHLVRLMGHFGSKMLTSEKEAFLSPHTEEPEEDMSAEQSSGDQLKRSVTEQKKASSAFHSRGQVDLKQGEFPEVPSPAPAKFVEGEFGHDSRTISTDQDASCSGAVVPEDAITVNYNGVASVSCNESPAITLEDNASTQSNFGSDISVVESRMKSLNVSGGLVMEDHQRRHENVNSSDKNRLPCHPLQRTMNQVPGFQGHVIHQGMPGLQDVQPFLHNPAPAPPLYAATAAFLNSGCPLYPGLQPPGFFHPRFSGFSPSSVFHPAYYGGYLPNSAFPVPNDAYSALGFSKQPIEATSEINPYTSQRLLRPSFSSPLQVQFLQQPFDNARRSMVHGQLTGRNGAQGQIDVRAPRKDSDAFSVISDKDLCHPAPGNLSISAQATESRVNYYGHPPTLGISHFPAPCPVLLPASPMPESNHPGPGNDLIASQNSPKNVVACSVGSGHRGSDSSDDSKRNSFLELLKSCNSRKLELSDISGQIVEFSTDQHGSRFIQQKLEYCSIDEKESVFREVFPHASKLMIDVFGNYVIQKFFEHGTAEHRKKLGEQLTGQIVTLSLQMYGCRVIQKALIVIELNQKVKLVQELHGHVMRCVYDQNGNHVIQKCIESVPIENIGFIISSFIGEVATLSSHPYGCRVIQRVLEHCSDEQIILRIIDEILESACSLAQDPYGNYVTQHVLETGKAQQRSQIISKLVGRFVQLSQHKFASNVVEKCLKYGDASERNLIIEEMVVQSDNVLLMMMKDQFANYVLQKIFDIGSDKQRGILLSCIRSHLPTLKKFPYAKHIVARYEQLSEVSVQEDQR*

Click here to download the sequence:
Link to NCBI Protein BLAST