Transcript Information: R_Transcript_88077.p1


Annotated TAIR IDAT4G16310.1
Annotated Gene NameLSD1-like 3
Annotated Gene Symbol(s)LDL3
Annotation TypeHomolog
Chromosome Positionchr4:9218636-9224764 | Forward length=1628
E-Value6E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7586806392352
Replicate 22.1883468039522
Replicate 33.8070352624591
Condition 2: 8 Hour
Replicate 13.3797391053944
Replicate 23.0234431785265
Replicate 33.8348473141663
Condition 3: 24 Hour
Replicate 15.9496289153487
Replicate 22.9199920221328
Replicate 34.3775409373795


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88077.p1 GENE.R_Transcript_88077~~R_Transcript_88077.p1 ORF type:complete len:355 (+),score=59.19,NAD_binding_8|PF13450.2|3.8e-09,DAO|PF01266.20|6.4e-08,Pyr_redox_2|PF07992.10|3.8e-05,Pyr_redox_2|PF07992.10|0.62 R_Transcript_88077:349-1413(+)
ATGCTAGTTACATATTCTTGCTTGAAGATCACCCCTTATATTACAACATTAAACATTAACACATGCAAAAAGGGCAGCACTAGAAGAAGACTGCAGTGCAGAGCAGAAAATTCCCAGAGTGAAGGAGCTGGAGTTTTTGTGTCACAAATACAACAAACACAAACACAAACAGATTCAAAAGACAACCTCAGAAAGAAAGTGTTGGTGGTTGGGTCTGGCTGGGCTGGTCTTGGTGCTGCTCATCACCTCTCCAAACAGGGTTTTGAAGTCACTGTTCTTGAAGGAGGTCTTGACCCTGGATTTTCTACCTACAGTCCTGATGAAGTTGGCATTCAAGGTTTCTGGTCTCCCTACCGCAATCTATTTAGCCTTGTCGATGAGCTAGACATTAAGCCATTCACAAATTGGGTAAGGTCTGCACAATATTCCGAACAGGGATTGGAGGTGGAATTTCCTATATTCCAAGATGCGCCTCAACTGCCAACTCCACTGGGAACCCTAACACAGACCCAATTCACTCGGCTACCTCTGCTGGATCGTTTGACAGCTCTTCCTTTGATTGCTGCCATTGTAGATTTTGACAACACCGACTCAGCATGGAGAAAATATGACCCAATTACTGCAAGAGAGCTTTTAAGACAGTTTGGATGCTCGGAGAGTTTGTACAGAAATATCTTTGATCCATTACTTGAAGTGCGTTTGTATGCGCCAGCTGAGCAAATTAGTGCTGCTGCAACTCTTGCTGTGCTCTACTATTATGTTGTTGCACATCAGAAAAATTTTGATTTGGTCTTGTGCCGTGGAACTGTGAGGCAAAAAATTTTTGAGCCATGGATGGATATACTCAGAAGCAAAGGGTGTGAGTTTCGCAAGGGCAGAGGAGTTACAGATTTCTTTTTTAACGAAGAGACAGGTTGCATTTCAGAAGTACTTTGTGGAAACGACCGAATCAAAGCTGATGCAGTAATCTTGGCCGTGGGAATCTCCACACTTCAGGAGATCATCAAAAGAAGCATTATGTACAAGGGAGGAGTTCCTGAACGTTTTGAACTTAGCTGGCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88077.p1 GENE.R_Transcript_88077~~R_Transcript_88077.p1 ORF type:complete len:355 (+),score=59.19,NAD_binding_8|PF13450.2|3.8e-09,DAO|PF01266.20|6.4e-08,Pyr_redox_2|PF07992.10|3.8e-05,Pyr_redox_2|PF07992.10|0.62 R_Transcript_88077:349-1413(+)
MLVTYSCLKITPYITTLNINTCKKGSTRRRLQCRAENSQSEGAGVFVSQIQQTQTQTDSKDNLRKKVLVVGSGWAGLGAAHHLSKQGFEVTVLEGGLDPGFSTYSPDEVGIQGFWSPYRNLFSLVDELDIKPFTNWVRSAQYSEQGLEVEFPIFQDAPQLPTPLGTLTQTQFTRLPLLDRLTALPLIAAIVDFDNTDSAWRKYDPITARELLRQFGCSESLYRNIFDPLLEVRLYAPAEQISAAATLAVLYYYVVAHQKNFDLVLCRGTVRQKIFEPWMDILRSKGCEFRKGRGVTDFFFNEETGCISEVLCGNDRIKADAVILAVGISTLQEIIKRSIMYKGGVPERFELSWH*

Click here to download the sequence:
Link to NCBI Protein BLAST