Transcript Information: R_Transcript_88110.p1


Annotated TAIR IDAT2G28000.1
Annotated Gene Namechaperonin-60alpha
Annotated Gene Symbol(s)CPN60A, CH-CPN60A, SLP
Annotation TypeOrtholog
Chromosome Positionchr2:11926603-11929184 | Forward length=586
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 190.735282015522
Replicate 288.392274960763
Replicate 382.245351369121
Condition 2: 8 Hour
Replicate 158.415083952643
Replicate 251.857403450804
Replicate 358.109934341034
Condition 3: 24 Hour
Replicate 1112.04663595774
Replicate 2102.82417626119
Replicate 3101.44540261026


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88110.p1 GENE.R_Transcript_88110~~R_Transcript_88110.p1 ORF type:complete len:586 (+),score=183.36,Cpn60_TCP1|PF00118.20|3.6e-95 R_Transcript_88110:341-2098(+)
ATGGCTTCAACAAATGCCATTTCCACTACTTCTATCCTCTCTACACCCAGCAAGGGGAACTTGAGAAAGGCAATTCCTCAGAGAGCTCAGAGAGTGAACTATAAACCTTCTGGCAAGCGGTTTGTCGTGAGAGCCACAGCTAAAGAAATTGCATTTGACCAGAACTCTCGGGCAGCCCTTCAGGCCGGTATTGATAAACTCGCAGATGCTGTTGGACTTACTCTTGGTCCCAGAGGGAGGAATGTTGTCTTGGATGAGTTTGGGAGCCCAAAGGTAGTTAACGATGGGGTTACTATTGCACGAGCTATTGAGCTGTCTAATGCAATGGAGAATGCTGGTGCAGCTTTGATTCGGGAGGTTGCGAGCAAAACAAATGACTCTGCTGGTGATGGAACCACAACAGCATCAGTACTTGCTCGTGAACTTATTAAACAGGGTTTACTGAGTGTTACATCTGGTGCAAACCCTGTATCTTTGAAGAGAGGAATTGACAAAACTATCCAAGGTTTAGTGGAACAGCTAGACAAGAATGCCAGGCCAGTCAAAGGTCGTGATGACATCAAGGCCATTGCTACTATTTCTTCTGGGAATGATGATTTAATTGGAACCATGATTGCTGATGCTATCGATAAAGTGGGTCCAGATGGTGTTTTATCTATCGAGTCATCATCTTCCTTCGAGACTACTGTTGAAGTTGAAGAGGGAATGGAGATTGATAGAGGGTACATCTCCCCACAGTTTGTTACAAATCCTGAAAAGTCAATTGTTGAATTTGAAAATGCAAGAATATTGGTGACTGACCAGAAGATCTCAGCAATTAAAGACATAATTCCATTATTGGAGAAGACCACTCAGTTGAGAGCACCTCTGCTTATCATTGCTGAAGATGTCACTGGAGAGGCTCTGGCTACCCTTGTTGTTAACAAGTTGCGGGGAATTCTTAATGTTGCTGCAATCAAGGCACCCGGTTTTGGTGAGAGGAGGAAGGCCATGCTACAAGATATTGCTATCTTGACAGGTGCGGAGTACCAAGCTAGTGACTTGGGATTGCTAGTTGAGAACACATCTGTTGAGCAGCTTGGTTTGGCAAGGAAGGTGACAATTACCAAGGATTCAACCACCCTCATTGCGGACGCTGCATCAAAAGATGAGCTTCAGGCTAGGATTGCACAGCTTAAGAAAGAATTGGCTGAGACTGATTCTGTTTACGATTCACAGAAGCTCGCTGAAAGAATTGCAAAATTATCTGGTGGTGTCGCTGTTATCAAGGTCGGTGCTGCAACAGAGACTGAGCTTGAAGACCGTAAATTGCGAATTGAAGATGCAAAGAACGCTACCTTTGCTGCCATAGAAGAAGGCATTGTGCCCGGAGGTGGTGCTGCTCTTGTTCACCTCTCAACTTGTGTGCCTGCCATCAAGGACAAGCTGGAGGATCCTGATGAACGCTTAGGTGCTGACATTGTGCAGAAGGCACTTGTAGCACCAGCATGCCTAATTGCCCACAATGCCGGTGTTGAAGGTGAGGTGGTTGTAGAGAAGGTCATTAACAGTGAGTGGGAAATCGGTTATAATGCGATGACTGACAAGTACGAGAACTTGGTAGAGTCAGGAGTCATTGACCCAGCTAAGGTCACAAGATGTGCATTGCAGAATTCTGCTTCAGTTGCTGGAATGGTGTTGACCACTCAGGCAATTGTTGTTGAGAAACCAAAGCCGAAGGCGGCTGCTGCTGCACCCCAAGAAGGTTTAACCATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88110.p1 GENE.R_Transcript_88110~~R_Transcript_88110.p1 ORF type:complete len:586 (+),score=183.36,Cpn60_TCP1|PF00118.20|3.6e-95 R_Transcript_88110:341-2098(+)
MASTNAISTTSILSTPSKGNLRKAIPQRAQRVNYKPSGKRFVVRATAKEIAFDQNSRAALQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELSNAMENAGAALIREVASKTNDSAGDGTTTASVLARELIKQGLLSVTSGANPVSLKRGIDKTIQGLVEQLDKNARPVKGRDDIKAIATISSGNDDLIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKSIVEFENARILVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKAMLQDIAILTGAEYQASDLGLLVENTSVEQLGLARKVTITKDSTTLIADAASKDELQARIAQLKKELAETDSVYDSQKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTCVPAIKDKLEDPDERLGADIVQKALVAPACLIAHNAGVEGEVVVEKVINSEWEIGYNAMTDKYENLVESGVIDPAKVTRCALQNSASVAGMVLTTQAIVVEKPKPKAAAAAPQEGLTI*

Click here to download the sequence:
Link to NCBI Protein BLAST