Transcript Information: R_Transcript_88125.p1


Annotated TAIR IDAT3G25600.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9307367-9307852 | Forward length=161
E-Value2.6E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.281067727465
Replicate 220.607480038219
Replicate 320.785743374287
Condition 2: 8 Hour
Replicate 115.870468021363
Replicate 213.664983347391
Replicate 318.263657599525
Condition 3: 24 Hour
Replicate 119.131506023087
Replicate 221.102253876787
Replicate 317.293988888413


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88125.p1 GENE.R_Transcript_88125~~R_Transcript_88125.p1 ORF type:complete len:162 (+),score=29.89,EF-hand_1|PF00036.28|0.00017,EF-hand_1|PF00036.28|0.00055,EF-hand_1|PF00036.28|3.2e-07,EF-hand_1|PF00036.28|3.8e-08,EF-hand_7|PF13499.2|3.9e-09,EF-hand_7|PF13499.2|7.1e-14,EF-hand_6|PF13405.2|0.00017,EF-hand_6|PF13405.2|0.041,EF-hand_6|PF13405.2|4.6e-07,EF-hand_6|PF13405.2|0.012,EF-hand_8|PF13833.2|0.58,EF-hand_8|PF13833.2|0.00043,EF-hand_8|PF13833.2|0.028,EF-hand_8|PF13833.2|1.2e-11,EF-hand_5|PF13202.2|0.00043,EF-hand_5|PF13202.2|0.0091,EF-hand_5|PF13202.2|0.00026,EF-hand_5|PF13202.2|0.00062,EF-hand_9|PF14658.2|0.06,EF-hand_9|PF14658.2|0.0096,EF-hand_4|PF12763.3|0.66,EF-hand_4|PF12763.3|1.7e+02,EF-hand_4|PF12763.3|0.11 R_Transcript_88125:386-871(+)
ATGGAGCCAACGGAAACAGAACAAATAAACCTCCTAAAGGACATATTTGCTAGATTCGACATGGACTCGGACGGGAGCCTAACGCTGCTAGAATTAGCAGCCCTTTTTCGGTCCCTCGGCCTGAAGCCCTCAGGGGATCAGCTCCACACAATCCTAACCACAATTGACGCAAATGGAAATGGATCAATCGAATTCGAGGAGCTTGTAGAAGCCATATTGCCAGAAATGAATGAAGCAGTATTGGTGAGCCAAGACCAGCTATTGGAGGTGTTTAGAATGTTTGATCGAGATGGTAATGGGGTTATAACGGCGGCCGAGCTGGCTGGTGCCATGGCTAAGATGGGTCAGCCTTTGACATATCGAGAGTTGACAGAAATGATCAATGAAGCTGATACTGATGGGGATGGGGTCATTAATTTTACTGAGTTTTCTTCTATTATGGCTAGATCTGCTGCTGATTTTCTTGGCCTTAATTTTTCTTTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88125.p1 GENE.R_Transcript_88125~~R_Transcript_88125.p1 ORF type:complete len:162 (+),score=29.89,EF-hand_1|PF00036.28|0.00017,EF-hand_1|PF00036.28|0.00055,EF-hand_1|PF00036.28|3.2e-07,EF-hand_1|PF00036.28|3.8e-08,EF-hand_7|PF13499.2|3.9e-09,EF-hand_7|PF13499.2|7.1e-14,EF-hand_6|PF13405.2|0.00017,EF-hand_6|PF13405.2|0.041,EF-hand_6|PF13405.2|4.6e-07,EF-hand_6|PF13405.2|0.012,EF-hand_8|PF13833.2|0.58,EF-hand_8|PF13833.2|0.00043,EF-hand_8|PF13833.2|0.028,EF-hand_8|PF13833.2|1.2e-11,EF-hand_5|PF13202.2|0.00043,EF-hand_5|PF13202.2|0.0091,EF-hand_5|PF13202.2|0.00026,EF-hand_5|PF13202.2|0.00062,EF-hand_9|PF14658.2|0.06,EF-hand_9|PF14658.2|0.0096,EF-hand_4|PF12763.3|0.66,EF-hand_4|PF12763.3|1.7e+02,EF-hand_4|PF12763.3|0.11 R_Transcript_88125:386-871(+)
MEPTETEQINLLKDIFARFDMDSDGSLTLLELAALFRSLGLKPSGDQLHTILTTIDANGNGSIEFEELVEAILPEMNEAVLVSQDQLLEVFRMFDRDGNGVITAAELAGAMAKMGQPLTYRELTEMINEADTDGDGVINFTEFSSIMARSAADFLGLNFSL*

Click here to download the sequence:
Link to NCBI Protein BLAST