Transcript Information: R_Transcript_88130.p1


Annotated TAIR IDAT3G25600.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9307367-9307852 | Forward length=161
E-Value5E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.8941853082946
Replicate 23.7180948653861
Replicate 35.0108488491584
Condition 2: 8 Hour
Replicate 12.8056720252052
Replicate 23.7268136401976
Replicate 34.1597441005053
Condition 3: 24 Hour
Replicate 15.739451806926
Replicate 22.0676805209916
Replicate 34.3319415526151


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88130.p1 GENE.R_Transcript_88130~~R_Transcript_88130.p1 ORF type:complete len:96 (+),score=14.05,EF-hand_1|PF00036.28|0.00026,EF-hand_1|PF00036.28|2.7e-05,EF-hand_1|PF00036.28|1.4e+02,EF-hand_7|PF13499.2|2.5e-11,EF-hand_7|PF13499.2|1.2e+03,EF-hand_6|PF13405.2|0.00025,EF-hand_6|PF13405.2|0.005,EF-hand_6|PF13405.2|99,EF-hand_5|PF13202.2|0.00018,EF-hand_5|PF13202.2|0.00091,EF-hand_5|PF13202.2|6e+02,EF-hand_8|PF13833.2|0.62,EF-hand_8|PF13833.2|0.0014 R_Transcript_88130:212-499(+)
ATGGAGCCAACGGAAACAGAACAAATAAACCTCCTAAAGGACATATTTGCTAGATTCGACATGGACTCGGACGGGAGCCTAACGCTGCTAGAATTAGCAGCCCTTTTTCGGTTCCTCGGCTTGAAGCCCTCAGAGGATCAGCTCCACAAAATCCTAGCTATAATTGATGCAAATGGGAATGGATCAATCGAATTCGAGGAGCTTGTAGAAGCCATATTGCCAGAAATGAATGAAGCAGTATTGGTGAACCAAGACCAGCTATTGGAGGTCTTTAGAATGTTTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88130.p1 GENE.R_Transcript_88130~~R_Transcript_88130.p1 ORF type:complete len:96 (+),score=14.05,EF-hand_1|PF00036.28|0.00026,EF-hand_1|PF00036.28|2.7e-05,EF-hand_1|PF00036.28|1.4e+02,EF-hand_7|PF13499.2|2.5e-11,EF-hand_7|PF13499.2|1.2e+03,EF-hand_6|PF13405.2|0.00025,EF-hand_6|PF13405.2|0.005,EF-hand_6|PF13405.2|99,EF-hand_5|PF13202.2|0.00018,EF-hand_5|PF13202.2|0.00091,EF-hand_5|PF13202.2|6e+02,EF-hand_8|PF13833.2|0.62,EF-hand_8|PF13833.2|0.0014 R_Transcript_88130:212-499(+)
MEPTETEQINLLKDIFARFDMDSDGSLTLLELAALFRFLGLKPSEDQLHKILAIIDANGNGSIEFEELVEAILPEMNEAVLVNQDQLLEVFRMFD*

Click here to download the sequence:
Link to NCBI Protein BLAST