Transcript Information: R_Transcript_88172.p1


Annotated TAIR IDAT3G42170.1
Annotated Gene NameBED zinc finger ;hAT family dimerisation domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:14321838-14323928 | Forward length=696
E-Value1E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.1231067140366
Replicate 24.8515199934963
Replicate 36.1751153981926
Condition 2: 8 Hour
Replicate 15.5006756941822
Replicate 25.3677598258045
Replicate 37.7359880949531
Condition 3: 24 Hour
Replicate 17.8392512484843
Replicate 26.4268854533518
Replicate 38.7101263837461


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88172.p1 GENE.R_Transcript_88172~~R_Transcript_88172.p1 ORF type:complete len:779 (+),score=137.41,Dimer_Tnp_hAT|PF05699.10|3.2e-25,DUF4413|PF14372.2|1.7e+03,DUF4413|PF14372.2|3.4e+03,DUF4413|PF14372.2|1.7e-22,zf-BED|PF02892.11|3.5e-10,zf-BED|PF02892.11|1.7e-07 R_Transcript_88172:244-2580(+)
ATGGAGAGGGCTATGATTGCATCCATAGATGCCGAGAATGGAATTGTTGAATGTGAAAGTAATAGGCAGAAGAAAAGATCATTGGCGTGGGATCACTTTGAAAAGCTGCCTACTCAAAGCAAGAATGAAGGCAAAGCGAAATGCAAACACTGTGATACAATCTTTAGTGCTACACCTAGGAGTGGAACATCTCATTTAAAACGTCATGTAGAAAGGTGTGCGAAGCGTGCAGCTCTAGACGTTGATCCCGTATCGGTAGACTTTGGGTTCAATGATTTTGAAGGTAATGGACACAGTGTTAAAATTGGAAAAAGGGTTTCCAAGGTCTGGCATGAATATGAGCTGTTTCCAGCTCCAAACATGAATGATGCTAAGGCCAAGTGCAAGTACTGTAAATTGGTTCTTTCTGCAGCTTCCAAAAACGGAACTTCTCATCTGAAACGTCATTTAGACAAGTGTCCGAAACGTGTGACTGTGACTGGTAACATTCAAGATTATTTCATTCCTAGTGAGAAGTTTGTTGATGGAAGCAACTTAGATAAGTTCCCTAAATATGTAACAACAACCAGTAACATGAAATGCCTATCTGCAATCAATGAGAATTTGGCTGAAGGAAGCAAACCTAAAGAAGTTAGTCAGGTTGACCAGGATGAGCTTCGGAGATATATATCTGTTTGCTTAATAAAAGGAGCTCATCCATTTAGCCTTGTGGAAGAGAGGGGCTTTAGGTCTATGATGTCTAAAGCATATCCACAATTTAAGCCATTCAGCCGGGCTGTTGTTAGGAGAGAATTGTTTTCCATGTATCTAAAAGAAAGGGATAACATTAAAGAAATGTTATCGAAAGCCCCTGGTCGTATCTGTTTGATGGTTGGAAATTGGAAAGCAAGAGAAACAAATGAGGAATACATTTGTGTTGCAGTGCAATTCATTGATGATCAGTGGAAATTGGTTAGGAGAGTTTTGTGTTTTAAAGCTTTGGCACCCCCTTACGATGGAACCTGTCTTGCAGATGAAATGGCATGTTTATCGTCTCAATATAACATCGAACGTAAAACATTCACCGTTACAGTTGATGAAGCTTCTTCTAGTGAGCCCATGGTTTCTTCAATTAAAAGAGGTCTTCTGTCAAAGAAAGCTCTCATAAGCGGTGGGCTATTTTTCCAAGTGAATTGTTATACTCATACTCTGAACCTTCTTGCCCAATCTACATTAAAGTTAGTTGATGATGTTCTTGATAAAATTCGTGAATTGATCAAGTATATCAACAAATCACCACTTCAGAGGAAGAAATTCTTTGATCTTGCTGAGAGAACCTTTGGATTGCAAATAAGAAAAAGATTGAACCTCGATATGCTGTTGAGATGGAATTCCACTTATAAGTTGATCGATCATGCTCTTTACTACAGGGTTGTCTTCAAGCACCTTATAGAGTCAAAGCAAGAACTTAGCTATTTGGCGCTCTCTAAAGATGAGTGGCAAAACTTGAGTGTTGTTTGCAAGTTTCTAAAGGTACTTTATGATGTTACACGTTTGTTTTCAGGCACTAACAGCCCAACCACAAATTTATTTTTGAAGGGGATGTTGATGGTTCATTGCCGTATGATGGAAATAGCTAAAGGACCAAATCCATTCTTGGCTAATGCTGTTAAAGCTCTGCAAGCAAAATTTGATGACTTTTGGTGTGAGAATAACTTGATTTTGTCTTGTGCTGCAATCTTAGATCCACGGTACAAGGTAAAATTTGTGGAGTACTGCTTTATGAAACTTCATGGCTTGAGTAATGTTGAGGATTGTGTTAATAAAGTTGTCAACACACTCTACCATTTGTTTGCCGAGTACAAGCAACAATCAATACATATTTCTTCACCGACAGTAGGATCTTCTAGTGTTAATACAAATTTCGTTGGTGGGAATGATGAAGGCGACTTGTTTGGAGATTACGATCAATTTCTGAGCTCAACATCAAGATCGCAGGGGAACAAATCAGAATTGGATCTCTATTTGGAAGAACCAAGTTATGACTTGAATTCTGACTTAGATGTGCTGGAGTTCTGGTGTAGAAGTTCAATGAGGTATCCTGAGCTTTCAGGGATGGCACGTGACATTCTCTCCATACCTGTTTCGACAGTTAACTCAAAGGATGCCTTCAGTGTTGGCAGCAAAACCTTGCCTTCCTTTCAGAGCTCTATAATGCCGGAGACACTTCAAGCGTTACTGTGTCTTCAAGATTGGCTTGGGGCAGAAGACAGTTCTGTTGAGGATCCTAGTGGGTCCAGTGAAGATGCTGAATACGATGATGAAGACGATGATAGTGTACTTACTGATTCATTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88172.p1 GENE.R_Transcript_88172~~R_Transcript_88172.p1 ORF type:complete len:779 (+),score=137.41,Dimer_Tnp_hAT|PF05699.10|3.2e-25,DUF4413|PF14372.2|1.7e+03,DUF4413|PF14372.2|3.4e+03,DUF4413|PF14372.2|1.7e-22,zf-BED|PF02892.11|3.5e-10,zf-BED|PF02892.11|1.7e-07 R_Transcript_88172:244-2580(+)
MERAMIASIDAENGIVECESNRQKKRSLAWDHFEKLPTQSKNEGKAKCKHCDTIFSATPRSGTSHLKRHVERCAKRAALDVDPVSVDFGFNDFEGNGHSVKIGKRVSKVWHEYELFPAPNMNDAKAKCKYCKLVLSAASKNGTSHLKRHLDKCPKRVTVTGNIQDYFIPSEKFVDGSNLDKFPKYVTTTSNMKCLSAINENLAEGSKPKEVSQVDQDELRRYISVCLIKGAHPFSLVEERGFRSMMSKAYPQFKPFSRAVVRRELFSMYLKERDNIKEMLSKAPGRICLMVGNWKARETNEEYICVAVQFIDDQWKLVRRVLCFKALAPPYDGTCLADEMACLSSQYNIERKTFTVTVDEASSSEPMVSSIKRGLLSKKALISGGLFFQVNCYTHTLNLLAQSTLKLVDDVLDKIRELIKYINKSPLQRKKFFDLAERTFGLQIRKRLNLDMLLRWNSTYKLIDHALYYRVVFKHLIESKQELSYLALSKDEWQNLSVVCKFLKVLYDVTRLFSGTNSPTTNLFLKGMLMVHCRMMEIAKGPNPFLANAVKALQAKFDDFWCENNLILSCAAILDPRYKVKFVEYCFMKLHGLSNVEDCVNKVVNTLYHLFAEYKQQSIHISSPTVGSSSVNTNFVGGNDEGDLFGDYDQFLSSTSRSQGNKSELDLYLEEPSYDLNSDLDVLEFWCRSSMRYPELSGMARDILSIPVSTVNSKDAFSVGSKTLPSFQSSIMPETLQALLCLQDWLGAEDSSVEDPSGSSEDAEYDDEDDDSVLTDSF*

Click here to download the sequence:
Link to NCBI Protein BLAST