Transcript Information: R_Transcript_88196.p1


Annotated TAIR IDAT1G42960.1
Annotated Gene Nameexpressed protein localized to the inner membrane of the chloroplast.
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:16125863-16127080 | Forward length=168
E-Value4.9E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1140.71373536001
Replicate 2158.42663041388
Replicate 3142.16060180885
Condition 2: 8 Hour
Replicate 1113.37697466482
Replicate 2142.02547981553
Replicate 3136.52211381758
Condition 3: 24 Hour
Replicate 1153.33032463594
Replicate 2148.63907809892
Replicate 3136.36703283715


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88196.p1 GENE.R_Transcript_88196~~R_Transcript_88196.p1 ORF type:complete len:165 (+),score=37.80 R_Transcript_88196:127-621(+)
ATGAGTTCCGTAACGAATTCCTTGATATTGTCCCGCAATTCCCCCGTTCACCTCCCCTCCGGTTCATCCCTCAAGTCAGCTGATCTTGGCATCTTGCGGCCCACCAACTTGTCCTTTTCTCCACGCTGTCCTAGAAAAGCTGCACAGAAGTCACTTGTTGTCGAGGCTACGTATCGTGATGATGGAAGACCTAGCAGTGCTAGCATGTTTGTTGGAGGCTTCATTCTAGGAGGATTAGTTGTTGGCACCCTGGGATGTGTTTACGCACCACAGATAAGCAAGGCTCTTGCTGGAGCTGACAAAAAGGATTTGATGCGGAAGCTGCCCAAATTTATTTATGATGAGGAGAAAGCTTTGGAGAAAACACGGAAAATACTGACAGAGAAAATTGAGCAGTTGAACTCTGCTATTGACGATGTCTCATCTCAGCTGCGTTCTGAAGGGACTCCAAGTGGAGCAGCAGTGAACTCGGATGAAGTTGAAGCTGCGATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88196.p1 GENE.R_Transcript_88196~~R_Transcript_88196.p1 ORF type:complete len:165 (+),score=37.80 R_Transcript_88196:127-621(+)
MSSVTNSLILSRNSPVHLPSGSSLKSADLGILRPTNLSFSPRCPRKAAQKSLVVEATYRDDGRPSSASMFVGGFILGGLVVGTLGCVYAPQISKALAGADKKDLMRKLPKFIYDEEKALEKTRKILTEKIEQLNSAIDDVSSQLRSEGTPSGAAVNSDEVEAAI*

Click here to download the sequence:
Link to NCBI Protein BLAST