Transcript Information: R_Transcript_8822.p1


Annotated TAIR IDAT5G52870.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21428191-21429367 | Reverse length=326
E-Value3E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9414093192332
Replicate 23.0740439836016
Replicate 34.1130882424031
Condition 2: 8 Hour
Replicate 13.4496660561036
Replicate 25.0034017379448
Replicate 35.4655402144259
Condition 3: 24 Hour
Replicate 15.8345808423999
Replicate 24.8740903625585
Replicate 35.3812312628007


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8822.p1 GENE.R_Transcript_8822~~R_Transcript_8822.p1 ORF type:5prime_partial len:362 (+),score=21.88 R_Transcript_8822:1-1086(+)
ATAAAGAGACCGACTCTCACTTTTCTCTCAAACACCACCACATCCAATTCCAACCCCATTCCTCCTTTCCCCTTCTCTCAGTCTCTCACACAGTTTCTTTTTCTCTTATTCACTCTCACCGAATCTTACTCTCCAAAATCAAAATCAAATCAAAAGAGAACAAAAATGGAAGCATTTGCTCTCCTCAAGTTCTGGAAAACCAGTACCTCAAAAGTAGCCGCCGGGGCCACCGTCGTCGACGGCGATAAATCTTTTTCCGATCCTTTCACCGAAGAAAGCGACGATGACGACGACTCTTTGTTCGAATTAGAGCTCACAATGCCTAAAAACTACGACTCCAAATCCCCCAAACCTGACTTTTCCACGAAGAAATTCGAACAAGAGAGAGAAATCGAACCTAAACCTACCTCAAAACCTCAGTCTCCAATCTCTATTCTCCGATCAGCTCCTCCGAAGCTCAAAGTCTTCATGTTCGGCAAACGCAACCGTAAAAAATCATCGAAACAAGAAGACTTCGAAATTGAGAGTTTCTCTTCGCCGAACTTCTCACCAAGAGGAAGCGAAAACAAAAATTCGAACCTCTTTACTGTCAAATTCAAGATCGAAGACGGTTCGATCGTTCCGAAATTCACTCGTAGCAACAGTTCGAGTCTTCTTAGCCCTAACGAGAGCTACGAAACTTCTAGACGCTTCTCGAAGGACGTCGTTCAGAAGTACTTGAATCTCATCAAGCCTAGATCATCGAGAAAGTTTTCCGAAACGGAGAAATTCGCTCCTTCTCGGACGAGATCCACAGCGGCGTCGTTTCCGTCACCGAGGAAAGAGAAAGAGCAGAGCAGTAGGTTTAAGGTAAAATGTAAGCAGTTAGGGAAGAGCAAATCAGCTTCGTCTGTCATCGGAGCTCCATCACCGCTGGTGAGAAACGATCATCCTCTTGACTGTATTGAAGGCGCTATCTTACACTGCAAGCGCTCTCTTACCTCCTCCAAAGGACATTCATCGCTATCGAGATGTAGCAGCGATCCATCACACGAGAAGTCTATTCAAGTGTCAGAGAGACCAGAAGGAAGAGAAGAAGAAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8822.p1 GENE.R_Transcript_8822~~R_Transcript_8822.p1 ORF type:5prime_partial len:362 (+),score=21.88 R_Transcript_8822:1-1086(+)
IKRPTLTFLSNTTTSNSNPIPPFPFSQSLTQFLFLLFTLTESYSPKSKSNQKRTKMEAFALLKFWKTSTSKVAAGATVVDGDKSFSDPFTEESDDDDDSLFELELTMPKNYDSKSPKPDFSTKKFEQEREIEPKPTSKPQSPISILRSAPPKLKVFMFGKRNRKKSSKQEDFEIESFSSPNFSPRGSENKNSNLFTVKFKIEDGSIVPKFTRSNSSSLLSPNESYETSRRFSKDVVQKYLNLIKPRSSRKFSETEKFAPSRTRSTAASFPSPRKEKEQSSRFKVKCKQLGKSKSASSVIGAPSPLVRNDHPLDCIEGAILHCKRSLTSSKGHSSLSRCSSDPSHEKSIQVSERPEGREEEN*

Click here to download the sequence:
Link to NCBI Protein BLAST