Transcript Information: R_Transcript_88221.p1


Annotated TAIR IDAT5G50460.1
Annotated Gene NamesecE/sec61-gamma protein transport protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20552168-20552509 | Reverse length=69
E-Value2.4E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1167.73636014598
Replicate 2165.91194250526
Replicate 3173.37256298264
Condition 2: 8 Hour
Replicate 1132.83181638048
Replicate 2128.46545842093
Replicate 3141.17919371412
Condition 3: 24 Hour
Replicate 1151.40148688074
Replicate 2177.16283121908
Replicate 3153.0708759149


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88221.p1 GENE.R_Transcript_88221~~R_Transcript_88221.p1 ORF type:5prime_partial len:153 (+),score=3.69,SecE|PF00584.16|9.6e-12 R_Transcript_88221:3-461(+)
CAGATGTACAATATAATTTTCACTGAACCTACCAAAAAAAAAAGGGGGGCCAAGGTGCCACATTGCCGTCGCCTATTGGTCGAGCCACGTTTGACGCCACAGCCAAAAGAAACGCGTCTCGTTTCGTCTCATTCCATTTCTCGGCCCGCCCATAAAAATCATCTCCGAAACCAAAAACCAGTCAACAAACACCAAACCCTTTCATTCTCTCTCTTCTGTCTCTGTATTCTTTCTCTCTCTACAACTACAATGGACGCCATTGACAACGTGGTGGATCCCCTGAGAGATTTCTCCAGAGACAGCGTTCGTTTGGTCAAACGTTGCCACAAACCCGACCGCAAAGAGTTCACTAAGGTTGCATTTCGGACAGCAGTAGGGTTCGTGGTGATGGGATTTGTTGGGTTTTTCGTCAAATTGATCTTCATCCCTATCAACAACATCATCGTTGGCTCCACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88221.p1 GENE.R_Transcript_88221~~R_Transcript_88221.p1 ORF type:5prime_partial len:153 (+),score=3.69,SecE|PF00584.16|9.6e-12 R_Transcript_88221:3-461(+)
QMYNIIFTEPTKKKRGAKVPHCRRLLVEPRLTPQPKETRLVSSHSISRPAHKNHLRNQKPVNKHQTLSFSLFCLCILSLSTTTMDAIDNVVDPLRDFSRDSVRLVKRCHKPDRKEFTKVAFRTAVGFVVMGFVGFFVKLIFIPINNIIVGST*

Click here to download the sequence:
Link to NCBI Protein BLAST