Transcript Information: R_Transcript_8825.p1


Annotated TAIR IDAT5G52870.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21428191-21429367 | Reverse length=326
E-Value1.5E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9249550363625
Replicate 26.8811404725683
Replicate 36.7372757635743
Condition 2: 8 Hour
Replicate 111.86569926015
Replicate 213.654544093497
Replicate 313.270505243476
Condition 3: 24 Hour
Replicate 113.11874698726
Replicate 211.120298600291
Replicate 312.262019432435


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8825.p1 GENE.R_Transcript_8825~~R_Transcript_8825.p1 ORF type:complete len:357 (+),score=24.04 R_Transcript_8825:146-1072(+)
ATGGAAGCATTTGCTCTGCTCAAGTTCTGGAAAACCAGTAATTCAAAGGTAGCCGCTGGAGCCACTGTCGTCGACGGCGATACTACTTTTTCCGATCCTTTCATAGAAGAAAGCGACGATGACGACGACTCTTTCTTCGAATTAGAGCTCGCAATGCCTAACAACTACGACTCCAAATCCCCCAAACCTGACTTTTCCACGAAGAAATTCGAACAAGAGAGAGAAATCGAACCTAAACCTACCTCAAAACCTCAGTCTCCAATCTCTATTCTCCGATCAGCTCCTCCGAAGCTCAAAGTCTTCATGTTCGGCAAACGCAACCGTAAAAAATCATCGAAACAACAAGACTTCGAGATTAAGAATCTCTCTTCGCCGAACTTCTCACCAAGAGGAAGCGAAAACAAAAATTCGAACCTCTTTACTGTCAAATTCAAGATCGAAGACGGTTCGATCGTTCCGAAATTCACTCGTAGCAACAGTTCGAGTCTTCTTAGCCCTAACGAGAGCTACGAAACTTCTAGACGCTTCTCGAAGGACGTCGTTCAGAAGTACTTGAATCTCATCAAGCCTAGATCATCGAGAAAGTTTTCCGAAACGGAGAAATTCGCTCCTTCTCGGACGAGATCCACAGCGGCGTCGTTTCCGTCACCGAGGAAAGAGAAAGAGGAGAAGCAGAGCAGTAGGTTTAAGGTAAAATGTAAGCAGTTAGGGAAGAGCAAATCAGCTTCGTCTGTCATCGGCGCTCCGTCACGGCTGGTGAGAAACGAACATCCTCTTGACGGTATTGAAGGCGCTATCTTACACTGCAAGCGCTCTCTTACCTCCTCCAAAGGACATTCATCGCTATCGAGATGTAGCAGCGATCCATCACACGAGAAGTCTATTCAAGTGTCAGAGAGACCAGAAGGAAGAGAAGAAGAAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8825.p1 GENE.R_Transcript_8825~~R_Transcript_8825.p1 ORF type:complete len:357 (+),score=24.04 R_Transcript_8825:146-1072(+)
MEAFALLKFWKTSNSKVAAGATVVDGDTTFSDPFIEESDDDDDSFFELELAMPNNYDSKSPKPDFSTKKFEQEREIEPKPTSKPQSPISILRSAPPKLKVFMFGKRNRKKSSKQQDFEIKNLSSPNFSPRGSENKNSNLFTVKFKIEDGSIVPKFTRSNSSSLLSPNESYETSRRFSKDVVQKYLNLIKPRSSRKFSETEKFAPSRTRSTAASFPSPRKEKEEKQSSRFKVKCKQLGKSKSASSVIGAPSRLVRNEHPLDGIEGAILHCKRSLTSSKGHSSLSRCSSDPSHEKSIQVSERPEGREEEN*

Click here to download the sequence:
Link to NCBI Protein BLAST