Transcript Information: R_Transcript_88322.p1


Annotated TAIR IDAT5G22000.2
Annotated Gene NameRING-H2 group F2A
Annotated Gene Symbol(s)RHF2A
Annotation TypeHomolog
Chromosome Positionchr5:7277436-7279553 | Forward length=375
E-Value1E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.655703873503
Replicate 218.281739148756
Replicate 325.807854758726
Condition 2: 8 Hour
Replicate 120.544868214311
Replicate 228.791847858835
Replicate 330.843370025143
Condition 3: 24 Hour
Replicate 126.592288583013
Replicate 221.065972871739
Replicate 327.374068658547


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88322.p1 GENE.R_Transcript_88322~~R_Transcript_88322.p1 ORF type:complete len:379 (+),score=87.44,zf-RING_2|PF13639.2|1e-10,zf-RING_2|PF13639.2|1.6e+04,zf-RING_11|PF17123.1|1.2e-08,zf-RING_11|PF17123.1|2.3e+03,zf-C3HC4|PF00097.21|3.2e-07,zf-rbx1|PF12678.3|2.5e-07,zf-rbx1|PF12678.3|1.4e+04 R_Transcript_88322:299-1435(+)
ATGGATGCTGCCAATGTTGATGATCATATGTCATCAGCTGCAGCTTTTGTTGAAGGTGGGGTGCAAGATGCTTGCGATGATGCATGCAGCATATGCCTTGAGGATTTTACTCAAAGTGATCCTTCAACGGTAACCAATTGCAAGCATGAGTTTCACCTTCAATGCATCCTAGAATGGTGCCAGAGAAGCTCAAATTGTCCGATGTGTTGGCGAGAAATTAGCCTGAAAGATGCAACTAGTCAGGAATTATTGGAGGCTGTGGAACGGGAGAGGATATCCAAAGCTAATAGATCAAGAACTCCTGCAGTGTTTCATCATCCCGCTCTTGGGGAATTCGACTTGCAGCATTTATCTTTGGGATCTGGTGACGTTGACCTTGAGGAGCATATATTTCAGCACTTGGCTGCTGCTGCCGCCATGCGAAGAGGCCATCTTTCTTTTCGAAGGGAAAGCCAACGGAATAGATCATCTTCACAGGCTCGTAATCCTTTTTTTATTTTCACTGCGCCGAGTCGCTCTCACGGCATAGCTGGTTCTCCCTCTACAAGTTCTGCTGGAGGAGGAAGTGAATCACCTGCAGTTTCCCTGGGGAGTGGTTCCATGCCACTTCCAAGTAGTCTAGATGCTCGAGCACTGCCAGTTTCATTTTCACCAGCAGAAACGGATCAGCTTTCTGGCCCTAGGGCTGAATCTAATTTTGCAACTGCTAATCAGCAGAGAATCTTATCAGGAACTAGAAGCTTTGCTGGTCAACCTCCCCCGGGAAGTCAAGACACAGGAGGACCATCTGACTTACAGTCACTGTCAGAATCTTTAAAATCTCGATTTAGTGCATGGTCGATGAGGTACAAAGAATCTTTTTCAAGAAATACTAGAGGTTGGAAGGAGAGGTTATTTTCTCGCAGCACTTCCATGGCTGAGGTGGGCTCAGAGGGTCAGAGAGAGGTGAATTCTGGCATTGCTAATGTTTCCCGCATGATGCATCAATTTGATGGCAGAGGAAATGATGGGGCTGGTCATACTCCTGGATCAAGTGATGGAGTCAGTAGGAACAACACAAATAATTCAGAAAATCGTGTAACTCGTATTTGTCATAGTGAGATGCCAGTTTGTGCTACGAGTTCAGCTTCAGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88322.p1 GENE.R_Transcript_88322~~R_Transcript_88322.p1 ORF type:complete len:379 (+),score=87.44,zf-RING_2|PF13639.2|1e-10,zf-RING_2|PF13639.2|1.6e+04,zf-RING_11|PF17123.1|1.2e-08,zf-RING_11|PF17123.1|2.3e+03,zf-C3HC4|PF00097.21|3.2e-07,zf-rbx1|PF12678.3|2.5e-07,zf-rbx1|PF12678.3|1.4e+04 R_Transcript_88322:299-1435(+)
MDAANVDDHMSSAAAFVEGGVQDACDDACSICLEDFTQSDPSTVTNCKHEFHLQCILEWCQRSSNCPMCWREISLKDATSQELLEAVERERISKANRSRTPAVFHHPALGEFDLQHLSLGSGDVDLEEHIFQHLAAAAAMRRGHLSFRRESQRNRSSSQARNPFFIFTAPSRSHGIAGSPSTSSAGGGSESPAVSLGSGSMPLPSSLDARALPVSFSPAETDQLSGPRAESNFATANQQRILSGTRSFAGQPPPGSQDTGGPSDLQSLSESLKSRFSAWSMRYKESFSRNTRGWKERLFSRSTSMAEVGSEGQREVNSGIANVSRMMHQFDGRGNDGAGHTPGSSDGVSRNNTNNSENRVTRICHSEMPVCATSSASD*

Click here to download the sequence:
Link to NCBI Protein BLAST