Transcript Information: R_Transcript_88330.p1


Annotated TAIR IDAT5G42350.1
Annotated Gene NameGalactose oxidase/kelch repeat superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16932106-16933797 | Forward length=563
E-Value4.4E-240
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 148.101552926904
Replicate 225.813944689901
Replicate 336.438971278811
Condition 2: 8 Hour
Replicate 123.144173717259
Replicate 223.318111372058
Replicate 335.805916840215
Condition 3: 24 Hour
Replicate 141.237568119626
Replicate 233.309483461454
Replicate 342.613562035963


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88330.p1 GENE.R_Transcript_88330~~R_Transcript_88330.p1 ORF type:complete len:584 (+),score=106.11,Kelch_1|PF01344.21|4e+03,Kelch_1|PF01344.21|2.4e+03,Kelch_1|PF01344.21|2.1e-06,Kelch_1|PF01344.21|2.2e-05,Kelch_1|PF01344.21|1.3e+03,Kelch_4|PF13418.2|5.8,Kelch_4|PF13418.2|0.00032,Kelch_4|PF13418.2|3.9,Kelch_4|PF13418.2|62,Kelch_4|PF13418.2|1.2e+03,Kelch_6|PF13964.2|4.8e-06,Kelch_6|PF13964.2|0.24,Kelch_6|PF13964.2|1.2e+03,Kelch_6|PF13964.2|1.8e+03,F-box|PF00646.29|1.4e-09,F-box-like|PF12937.3|1.6e-07,F-box-like|PF12937.3|7.4e+03 R_Transcript_88330:453-2204(+)
ATGTTTGCTGATAATAGACATGTTGTGGAAGATGGTCTATGTCAAGACTTGGAGTCTATGAGTGTATCAAGAAAGCTTGTGAGAACTGTGAGCCAGAAATTGCGGAAAAAGAGAGTTCACAGAAGTGCAGGGGATGAAGAGGAAACAACAAATGGGATTTCGTTGAGTTGTCTTACTTTGTATGGAAGAGGTGGGGGTTGTAAAGTAGGGGCTGACACTGGTGAAGATTTCGGGGATTCCAGTGGTAGGAGGAGGTCGAGTGCTAGTGAAGAAGGAGGGAAGCTATATAACCCTGTGTGTGGATCTGAGGAAACGGGGATTGATTGCTTTTCATATGGAAGGAAGGATTGGTTTTGGAAGAGTAGTAACCGAAAGGCCTTGGAATTTAATGACTTGGAAAGAAACAGTAGAATGCATCATTCGCTTCCAGATGACATTTTAGAGATGTGTTTGATGAGGCTTCCATTGTCAAGTCTCATGAACGCTCGTTTGGTGTGCAAGAAGTGGAATTACTTGGCCTCATCACCTCGATTTATGCAGATGAGGAGAGAAGGTTTATATCCAACGCCATGGCTACTTGTGTTTGGCGCTGTTAAGGATGGCTATTGCTCTGGGGAAATTCACGCCCTGGATGTCGCTCTTAACCAATGGCACAGTGTAAATGCTGAAGTTCTCAGAGGAAGGTACTTGTTTTCCGTTGCTAGTATCCGGGATGAGGTTTTTGTCATTGGAGGTTGTTCCAGCTTGACTAGTTTTGGAAGGGTAGATAGGAGTTCATTCAAGACACACAAAAGTATGCTCGTTTTTAGGCCCTCAACAAAATCTTGGCGTAAAGTTGCATCTATGAAGTATGCTAGATCATCACCAGTTCTTGGGATTTTGGAAGTTAGCCTAGACTTCTCCATCATTCACAGCCAGTCAACCCGTCAAGATAGACGCTTTCCCAGGTCGAGGTTAACTGGAGCTTCAGATGTGTATGAGGATCCCCATCGACTTTCAGTCAGAAGACAATTGAGAAGCCTGTCAGATGAAAATGCTGGTTTCTTAGCCCCAATTAAGAAGCAATGCAGGCCATTGAGACAAAGAAGTGAGAGTTCGAACCTCAGAGACTCTCGGAGGTTTGTGTTGATAGCCATTGGAGGCCGTGGATCATGGGATGAGCCCTTGGATTCTGCAGAGATTTATGACTCCATGTCTAATAAATGGATCGAAATTCAGAAACTACCTGTAGATTTTGGCATTGTTTGTTCAGGGGTTGTTTGTAATTCAACATTCTTTGTTCATTCCGACTCTGACAAACTTGCAGGGTATGACATTGAAAGGGGATACTGGACTGTAATACAAACCACCCCTTCACCTCCTCGTGTTCATGAATATTACCCCAAACTTGTCGCTTGCAACAGCCGTTTGTTCATGCTTTCTGTATCTTGGTGTGAAGGAGATGGTCAAATAGGCCGGAGGAACAAAGCCATCCGAAAGATGTGGGAGCTTGATCTTATGTATCTCACTTGGACCGAGGTATCTACCCATCCTGATGCCCCTATGGATTGGAATGCTGCATTTGTCGCCGACAAAAATCTCATATTTGGGGTTGAGATGTTCAAAATTTTTGGACAAGTTTTGGATTTCTTCACCGTCTGTAATGTGACTGACAAGGTGATCAAATGGAGCCATATAGCTAGGAATCATGTGGTTCATGGACTCGATGCATCTTCGTGTATGACGAAAACTATTGTTGCCCTTCATCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88330.p1 GENE.R_Transcript_88330~~R_Transcript_88330.p1 ORF type:complete len:584 (+),score=106.11,Kelch_1|PF01344.21|4e+03,Kelch_1|PF01344.21|2.4e+03,Kelch_1|PF01344.21|2.1e-06,Kelch_1|PF01344.21|2.2e-05,Kelch_1|PF01344.21|1.3e+03,Kelch_4|PF13418.2|5.8,Kelch_4|PF13418.2|0.00032,Kelch_4|PF13418.2|3.9,Kelch_4|PF13418.2|62,Kelch_4|PF13418.2|1.2e+03,Kelch_6|PF13964.2|4.8e-06,Kelch_6|PF13964.2|0.24,Kelch_6|PF13964.2|1.2e+03,Kelch_6|PF13964.2|1.8e+03,F-box|PF00646.29|1.4e-09,F-box-like|PF12937.3|1.6e-07,F-box-like|PF12937.3|7.4e+03 R_Transcript_88330:453-2204(+)
MFADNRHVVEDGLCQDLESMSVSRKLVRTVSQKLRKKRVHRSAGDEEETTNGISLSCLTLYGRGGGCKVGADTGEDFGDSSGRRRSSASEEGGKLYNPVCGSEETGIDCFSYGRKDWFWKSSNRKALEFNDLERNSRMHHSLPDDILEMCLMRLPLSSLMNARLVCKKWNYLASSPRFMQMRREGLYPTPWLLVFGAVKDGYCSGEIHALDVALNQWHSVNAEVLRGRYLFSVASIRDEVFVIGGCSSLTSFGRVDRSSFKTHKSMLVFRPSTKSWRKVASMKYARSSPVLGILEVSLDFSIIHSQSTRQDRRFPRSRLTGASDVYEDPHRLSVRRQLRSLSDENAGFLAPIKKQCRPLRQRSESSNLRDSRRFVLIAIGGRGSWDEPLDSAEIYDSMSNKWIEIQKLPVDFGIVCSGVVCNSTFFVHSDSDKLAGYDIERGYWTVIQTTPSPPRVHEYYPKLVACNSRLFMLSVSWCEGDGQIGRRNKAIRKMWELDLMYLTWTEVSTHPDAPMDWNAAFVADKNLIFGVEMFKIFGQVLDFFTVCNVTDKVIKWSHIARNHVVHGLDASSCMTKTIVALHL*

Click here to download the sequence:
Link to NCBI Protein BLAST