Transcript Information: R_Transcript_88349.p1


Annotated TAIR IDAT1G22970.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71150.1); Has 134 Blast hits to 132 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 10; Plants - 48; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8130840-8132199 | Reverse length=357
E-Value1.9E-87
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.7103293967864
Replicate 28.4126590893585
Replicate 310.566407578023
Condition 2: 8 Hour
Replicate 19.3161708385142
Replicate 210.916928845023
Replicate 312.651122553603
Condition 3: 24 Hour
Replicate 118.860959473265
Replicate 213.73812422477
Replicate 314.665499099975


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88349.p1 GENE.R_Transcript_88349~~R_Transcript_88349.p1 ORF type:5prime_partial len:297 (+),score=72.05,GCIP|PF13324.2|1.1e-58 R_Transcript_88349:1-891(+)
CAGCAAAAAAGTAGAAAGCTACATAGAGAGAGGGAGAGGGAGATGGGGAAAGTGGAGGCTGAGAAACTGAACCGAACACTATGTACTCAAATGAGTAACATCCATGAAACATTGCAGATATTGGAGCAAACTCCTTCTTCTTCTCTCAAGAAAGTCACTTGGGATGAAGTCATTAAGATGGGTGAACAACTCTCCAAACATGCCACTACCGCTGGAATGTTTTTTACTGAAGTAAAAACAGAAGTAAAGGCGCTAGAAGAAAACATGGAGGTGTATTACAATGTGTTGCAGGGTCTCCTTCTACTCGCATATGGGAGTACAGTTGATGCAGGGCCAACTCTATTATCTAATATCCATGCATCAATAAAGCATGTCGTAGATAGCAGCTTTGGGCTATGGAGGGAATGCGTTTCTTCTTATGAGACACGTAATAAGGAGCAAAAGCGAACCATTCCACAGTCAGTTGGTGTAGTTTGGGATGCGTGTTCTGCTCTCAAGAAGATCCCTGCAACAAATATTACCGCAATAGGGAGGGAAATGACACGGGTTGCTTTTTCCATCAAGGATGTATTACGTGAAATGAAAGAGCTTGAACCATGTTCATCTGATCCGACCAATGAAGTGTCTGAAGCAAGCGAGCCCCAGGAAAGTGAAACTTCTAATGCTGATGATGATGATGATGATTTGGGAAAAGACCTATCACCTGAGGAGATGAAAGTTGCTCAACTTGCAATCGGGTTTATTTCAGAAGCACTTGCTGTCATCAAAGAACTTGTACGTTGTATCACTGGTTTGATCAAGAGGGAAAATTTTGGAGACACGAGTGATGGGGTGGAGTCTCTGGAAAGGCTTATTAGAGCATTGCCGTGGTGTTGGTGCTCTAGTGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88349.p1 GENE.R_Transcript_88349~~R_Transcript_88349.p1 ORF type:5prime_partial len:297 (+),score=72.05,GCIP|PF13324.2|1.1e-58 R_Transcript_88349:1-891(+)
QQKSRKLHREREREMGKVEAEKLNRTLCTQMSNIHETLQILEQTPSSSLKKVTWDEVIKMGEQLSKHATTAGMFFTEVKTEVKALEENMEVYYNVLQGLLLLAYGSTVDAGPTLLSNIHASIKHVVDSSFGLWRECVSSYETRNKEQKRTIPQSVGVVWDACSALKKIPATNITAIGREMTRVAFSIKDVLREMKELEPCSSDPTNEVSEASEPQESETSNADDDDDDLGKDLSPEEMKVAQLAIGFISEALAVIKELVRCITGLIKRENFGDTSDGVESLERLIRALPWCWCSSG*

Click here to download the sequence:
Link to NCBI Protein BLAST