Transcript Information: R_Transcript_8836.p1


Annotated TAIR IDAT2G35920.1
Annotated Gene NameRNA helicase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:15075674-15080506 | Forward length=995
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.623714348074
Replicate 29.597151781413
Replicate 310.978446080316
Condition 2: 8 Hour
Replicate 112.231126367091
Replicate 214.404116750156
Replicate 318.256634404112
Condition 3: 24 Hour
Replicate 114.301584830373
Replicate 211.080800271929
Replicate 315.2179701825


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8836.p1 GENE.R_Transcript_8836~~R_Transcript_8836.p1 ORF type:5prime_partial len:1037 (+),score=203.40,HA2|PF04408.19|9.7e-22,OB_NTP_bind|PF07717.12|9.2e-19,Helicase_C|PF00271.27|1e-14,DEAD|PF00270.25|5.7e-06 R_Transcript_8836:2-3112(+)
TCTTGGCGCAACTACTTCTTCTCGTCTCCTAAACCCATTCTCATTCTCCCTCCTCACACTTTCCTGAACTTTCTCTCTCCATTCCCCACCAAAACCCTCCTTCTCTCTCCTCTTCCCCATTTCTCACCAATCATGTCCTACCGCCCTAACTACCGAGGCGGCCGACGCGGCGGCAACTCCGGAGGAGGTCGAGGTGGAAGAGGAGGAGGCAGCGGTGGAAGAGGCGGTCGTGGAGAACAGCGATGGTGGGACCCGGTCTGGCGAGCCCAACACCTGGCACAAAAAGCAGCCGAGCTAGAAGTGATGGATGAGAATGAGTGGTGGAATAAATTGGAGCAGTTTCAGAAAGGAGGGGAGCAAGAGGTTATTATTAAGCGTCATTTTAGGAGGGAGGATCAAGATGTTCTTTCTGATATGGCTCATCAACTTGGCCTCTACTTCCATGCATATAACAAAGGGAAGACACTTGTTGCAAGCAAAGTTCCCCTGCCAAATTATCGTGCAGATCTAGATGAACGTCATGGATCCACACAGAAGGAGATACGAATGTCTACTGATACTGAGAAAAGAGTTGGTTCATTGTTAAATAACTCCAAGGGAACAAGTGCTCCTGAAACGTCCACTGGTGCTTCTTCTCAGAGTGCAAGAAGTTCAGCGTCATCAATGAACATTGTGAAATCAGTCTCTTCCACAGAGAATGATGTTGCGAAGGAGAAAATTAGTGCTGAACTCAAGCAGAGAGAAGACAGGATGAAGGGTAGCGAGAGTGTACAGGCAATGCAGGTGTTTAGAGAGAAACTCCCTGCTTTCAAAGTGAGATCTGAATTTCTGAAAGCTGTTGCAGGGAATCAGGTCCTAGTAGTTTCAGGGGAGACTGGATGTGGTAAAACAACCCAGCTTCCTCAGTTCATTTTGGAAGATGAGATTTCACTGCTTCACGGTGCTGACTGCAACATAATATGTACCCAACCACGTCGTATATCAGCTATATCTGTTGCTGCTCGAATATCTTCTGAAAGGGGAGAGAATCTGGGTGAAACCGTTGGCTATCAGATACGCTTGGAGGCGAAGCGTTCTAAGCAAACACGGTTGCTGTTCTGCACAACAGGAGTTTTACTCAGACAGTTGGTCCTGGATCCATGTTTAACAGGTGTTAGCCATCTGCTGGTGGATGAAATTCATGAAAGAGGAATGTATGAGGATTTCCTTCTTATTATATTAAAGGATCTCCTTCCTCGTCGTCCAGATTTAAGACTTATTCTTATGAGTGCTACTATAAATGCTGAGTTGTTCTCGCAATATTTCGGGAATGCGCCCACCATTCATATTCCGGGCCTTACCTTTCCAGTCACAGAGCTCTTTCTGGAAGATGTATTGGAGAAAACCCTATATAAGATTACCTCAGATTCAAATAGTTTCCAGGGTAGCTCAAGGCGGCAGAATAGGCAACTGGATTCAAAAAAGGATCCCTTAACTGAATTATTTGAGGAAGTTGACATTGGTTCACAGTACAGGAGTTATAGCGTCGGTACAAGAACATCCCTTGAAGCCTGGTCTGGTTTGCAGCTTGACTTAGGTCTTGTGGAGTCAACAATTGAACATATTTGTCGCCATGAAGGTGATGGAGCAATACTTGTATTTCTCACTGGTTGGGATGAGATCTCTAAGCTACTAGACAAAATAAAGGCAAACAATTTTCTTGGAGACACCAGAAAGTTTCTTGTTCTTCCGCTGCATGGTTCAATGCCAACTGTTAATCAGCGTGAAATATTTGACCGACCACCTGCTAGTACAAGGAAAATTGTTCTAGCAACAAATATTGCAGAGAGTAGCATTACTATTGACGATGTAGTTTATGTTATTGACTGTGGGAAGGCAAAAGAGACTAGCTATGATGCTTTGAACAAGCTAGCTTGCCTGCTGCCATCCTGGATTTCAAAAGCTTCAGCTCATCAGAGAAGGGGTCGTGCTGGTCGAGTGCAACCTGGTGTTTGCTACAGACTATATCCAAGAATGGTTTATGATGCGATGCCTCAGTATCAGTTGCCAGAAATCCTTAGGACTCCCTTGCAAGAACTTTGTCTAAACATAAAGAGTCTGCAACTTGGGAGCATTGGATCATTTTTGGCAAAAGCGCTTCAGCCACCAGATTCTCTTTCTGTTCAAAATGCTATTGAACTTCTGAAGACAATTGGGGCTCTAGATGATAGAGAAGAGCTTACCCCTCTTGGTCGGCATCTTTGCACCCTGCCTTTGGAGCCAAATATCGGGAAGATGCTTCTGATGGGGTCAATCTTCCAATGCCTGAATCCTGCCTTAACAATCGCAGGTGCTCTTGCACATCGTGATCCCTTTGTCCTGCCAATCAATAGGAAGGAGGAAGCTGATGCTGCGAAGAGGTCTTTTGCTGGTGATAGCTGCAGTGATCATATAGCCCTCCTAAAAGCATTTGAAGGGTGGAAAGATGCAAAAAGCAATAGGGCGGAGAGATCTTTCTGTTGGGAGAACTTCTTGTCGCCTATAACTCTGCAGATGATGGATGATATGCGGAAACAGTTTGTGGATCTACTCTCAGACATAGGCTTTGTGGACAAATCAAAGGGTCCTCAAGCTTACAACCAGTACAGTGACGATTTGGAGATGGTGTGTGCCATTCTCTGTGCTGGACTTTACCCCAATGTCGTGCAATGCAAAAGAAGAGGAAAGCGGACAGCATTTTACACTAAAGAAGTTGGGAAAGTTGACCTTCATCCGGCCTCTGTGAATGCTGGTGTTCATCTTTTCCCCTTACCGTATATGGTGTACAGTGAAAAGGTTAAAACAAGTAGCATTTACATTCGTGATTCAACCAATATATCTGATTATGCTCTCCTCCTGTTTGGCGGTAATCTTCTTCCAAGTAAATCTGGAGAAGGCATTGAGATGCTAGGAGGCTACCTTCATTTTTCTGCATCAAAAAGTGTGTTAGAACTAATAAAGAAATTGCGAGGGGAGCTAGATAAACTTCTGAACCGGAAAATTGAAGAACCAGGCCTAGACATCACCCAAGAGGGAAGAGGAGTTGTTGCGGCTGCAATCGAATTACTGCACAGTCAGAATGTAAGATACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8836.p1 GENE.R_Transcript_8836~~R_Transcript_8836.p1 ORF type:5prime_partial len:1037 (+),score=203.40,HA2|PF04408.19|9.7e-22,OB_NTP_bind|PF07717.12|9.2e-19,Helicase_C|PF00271.27|1e-14,DEAD|PF00270.25|5.7e-06 R_Transcript_8836:2-3112(+)
SWRNYFFSSPKPILILPPHTFLNFLSPFPTKTLLLSPLPHFSPIMSYRPNYRGGRRGGNSGGGRGGRGGGSGGRGGRGEQRWWDPVWRAQHLAQKAAELEVMDENEWWNKLEQFQKGGEQEVIIKRHFRREDQDVLSDMAHQLGLYFHAYNKGKTLVASKVPLPNYRADLDERHGSTQKEIRMSTDTEKRVGSLLNNSKGTSAPETSTGASSQSARSSASSMNIVKSVSSTENDVAKEKISAELKQREDRMKGSESVQAMQVFREKLPAFKVRSEFLKAVAGNQVLVVSGETGCGKTTQLPQFILEDEISLLHGADCNIICTQPRRISAISVAARISSERGENLGETVGYQIRLEAKRSKQTRLLFCTTGVLLRQLVLDPCLTGVSHLLVDEIHERGMYEDFLLIILKDLLPRRPDLRLILMSATINAELFSQYFGNAPTIHIPGLTFPVTELFLEDVLEKTLYKITSDSNSFQGSSRRQNRQLDSKKDPLTELFEEVDIGSQYRSYSVGTRTSLEAWSGLQLDLGLVESTIEHICRHEGDGAILVFLTGWDEISKLLDKIKANNFLGDTRKFLVLPLHGSMPTVNQREIFDRPPASTRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYRLYPRMVYDAMPQYQLPEILRTPLQELCLNIKSLQLGSIGSFLAKALQPPDSLSVQNAIELLKTIGALDDREELTPLGRHLCTLPLEPNIGKMLLMGSIFQCLNPALTIAGALAHRDPFVLPINRKEEADAAKRSFAGDSCSDHIALLKAFEGWKDAKSNRAERSFCWENFLSPITLQMMDDMRKQFVDLLSDIGFVDKSKGPQAYNQYSDDLEMVCAILCAGLYPNVVQCKRRGKRTAFYTKEVGKVDLHPASVNAGVHLFPLPYMVYSEKVKTSSIYIRDSTNISDYALLLFGGNLLPSKSGEGIEMLGGYLHFSASKSVLELIKKLRGELDKLLNRKIEEPGLDITQEGRGVVAAAIELLHSQNVRY*

Click here to download the sequence:
Link to NCBI Protein BLAST