Transcript Information: R_Transcript_8838.p1


Annotated TAIR IDAT1G48650.2
Annotated Gene NameDEA(D/H)-box RNA helicase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:17989517-17995169 | Reverse length=1206
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.080682483424
Replicate 25.3110372047971
Replicate 37.6870839487932
Condition 2: 8 Hour
Replicate 16.00791458655
Replicate 27.0514079330551
Replicate 39.8563551766688
Condition 3: 24 Hour
Replicate 110.975612730277
Replicate 27.0294164086326
Replicate 310.02109919476


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8838.p1 GENE.R_Transcript_8838~~R_Transcript_8838.p1 ORF type:complete len:1186 (+),score=237.88,HA2|PF04408.19|2.1e-22,OB_NTP_bind|PF07717.12|5.5e-16,Helicase_C|PF00271.27|6.6e-13,dsrm|PF00035.21|2.2e-08,DEAD|PF00270.25|6.5e-07 R_Transcript_8838:171-3728(+)
ATGCCCTGCTCTTCTCTCTTCCGCCCCACTTATCTCCGCACAACCATGTCCCTTTCTCGCCCCTTATCTCTTCTGCAATTCGATAGAGACAGAAACACCCTCAAAACCCTACCTTTTACTAGGGCTCCTCGACTCCTTACTTTGCGCCAATGGCGCCCCCTTTCTTTTAGGGCATTAGCTCTGGGGCCCTGTACTAGCTCCCTCGAGCTCCATAATAATGGCCCCCCTTTGCCATATTGGGTTCAGCAGAATCGGGACTTCGGCAGGTTCGCTTACGACGACGACGAGGATGATTTCTCCGAGGATGATTATGATAGAGACTCCACTTCCAGTTCCGGGAGCCAATTATGTTCTTCAACAAGTGCCAATATTGATGAGTGGAAATGGAAGTTGACTATGCTTGTTCGTAACAAAGATGAGCAAGAAGTGGTGTCAAGAGAGAGAAAGGACAGACGTGATTTCGAGCAACTCTCTGCTTTGGCAACTAGAATGGGACTGCATAGCCGCCAATATGCGAAAGTGGTTGTATTCAGTAAAGTTCCCCTGCCAAATTATCGTTCTGATCTGGATGATAAGCGTCCACAACGGGAGGTTATACTTCCCTTGGACCTGGTAAAGGATGTCCATTTCCTTCTCAAAAAGCATCTTTCTCAAAAATCGATGAGCAAGGGGGCTCTTCCAAATTCTTCAATATCACAGAGCTATGACAGTCTAGACAAAGATCAGGCATCATATGATCTACCTGAGCCCCTGGTGGAGATGAGTGCTGCAAAGGAGAGATTCCTTCGGCGGAAAAGCTTGCAGATGCGGGATAAGCAGTGTGATTGGCAGAGTTCTCCAGAGGGTCAGAAGATGCTAGAATTTCGAAAAAGTCTACCAGCATACAAAGAAAGAGATGCTTTGTTGAAAGCCATCTCAGAGAACCAGGTGATAGTTGTCTCTGGTGAAACTGGCTGTGGTAAGACAACTCAACTTCCTCAGTACATTTTGGAATCTGAAATTGAAGCTGCTTGTGGGGCTAGTTGTAGCATTATTTGTACGCAGCCTAGAAGAATATCTGCTATGGCTGTTTCTGAGAGGGTTGCTGCAGAAAGAGGCGAACAACTTGGGGAATCTGTTGGTTACAAAGTAAGATTGGAGGGTATGAAAGGGAGAGACACACGCCTCCTATTCTGCACTACTGGTGTGTTGCTGAGAAGACTTCTTGTTGATAGAGCTTTAAGGGGTGTGACTCATGTCATTGTTGATGAGATTCATGAACGTGGCATGAATGAAGATTTTCTCCTTATCGTGTTGAAAGATCTCCTGCCCCGTCGGCCAGATTTGAGGTTGATATTGATGAGTGCCACCCTGAATGCTGAGCTATTTTCCTCTTACTTTGGTGGGGCTCCTACGCTACACATTCCTGGCTTCACGTATCCGGTCAGAGCTCACTTCTTGGAGAATATTTTGGAAGTGACTGGATATAGGCTTAGCCCCTATAACCAGATTGATGACTACGGTCAAGAAAAGATGTGGAAAATGCAAAAACAAACTATTAGAAAGAGGAAGAGCCAAATTGCTTCTGCAGTTGAGGATGCACTTGAGGCTGCTGATTTTAGCGGATATAGTCGTCGGACTCAAGACTCATTGTCTTGTTGGAACCCCGATTCCATTGGTTTTAATCTAATTGAACAGGTGCTTTCCCATATATGCAAGTCCGAAAGGCCAGGTGCTGTTTTAGTATTTATGACAGGTTGGGAGGATATTAATACTTTGAAGGATCAGCTCCAAGCTCATCCTTTACTTGGAGACCCAAGTAGAGTTCTACTGCTTGCATGTCATGGTTCCATGGCTAGTTCTGAACAGAGGCTGATATTTGATAGACCTCCAGATGGAGTGAGAAAAATAGTACTGGCAACCAATATGGCGGAGACTAGTATCACCATAAATGATGTAGTTTTTGTAGTTGATTGCGGTAAAGCAAAAGAGACATCATATGATGCATTGAATAATACTCCTTGTTTATTACCTTCTTGGATCTCAAAGGCTGCCGCTCGACAGAGAAGAGGTAGAGCAGGCCGTGTTCAACCAGGGGAGTGCTATCATCTTTACCCAAGATGTGTGTATGATGCTTTTGCTGATTACCAGTTACCAGAACTTTTGAGGACACCCCTGCAGTCTCTTTGTTTGCAAATAAAAAGCTTACAGCTTGGTGGCATTTCTGAATTTCTGTCAAAGGCTTTGCAAGCCCCAGAGTCATTGTCGGTTCAAAATGCTGTTGATTATTTGAAGAGCATCGGAGCTTTAGATGAAAATGAAAATCTCACAGTACTTGGTCAACACTTGTCCGTGCTCCCTGTGGAGCCCAAACTAGGGAAAATGCTCATTTATGGGGCTATATTCAGATGCCTGGATCCAATAATGACTGTTGTTGCTGGTTTAAGTGTTAGAGACCCGTTCTTGATGCCATTCGACAAAAAGGATCTTGCAGAATCTGCTAAGGCGCAGTTCTCTGGTCGTGAGTTCAGTGACCATCTAGCTCTGGTTCGGGCTTATGAAGGGTGGAAAGATGCCGAAAGGCAGAAATCTGGTCATGAATACTGTTGGACAAACTTCCTATCTGTCCAGACTCTAAAAGCGATTGATTCCTTGCGGAAGCAATTCTTTTACTTACTTAAAGATACGGGTCTTGCTGACCTCGACAAAGAAAGCTGTAATATGTGGAGCCATGATGAGCATCTTGTTCGAGCAATCATCTGTGCGGGTTTGTTCCCTGGTGTTAGTTCGGTCGTGATTAAAGAGAAGTCAATAATGTTAAAAACAATGGAAGATGGTCAGGTCCTTCTGAATATGAATTCAGTGAATGCGCAGGAACCTAAGATACCATATCCATGGCTTGTGTTTAATGAGAAGGTGAAAGTTAATGCAGTATTCTTGAGGGATTCAACAGCAGTGTCAGATTCTGTGTTGTTACTGTTTGGGGGAAAAGTCTCAAGAGGTGGTTTGGATGGATACCTGAAAATGCTGGATGGATACTTGGAATTTTTCATGAAACCTGCCTTGGCAGACATCTATTTGTGCCTTAAGAGAGAACTTGAAGAACTTATCCATAGCAAGCTCTCAGATCCCAAGTTGGATATCAGCAGTCAAATGGACCTCCTGTCTGCAGTAAGAATGTTGGTCTCAGAAGACTTATGTGAGGGTAGATTTGTATTTGGTTGTCAGTTGCCCATGTCCTCGAAGAAGGCTTCTAAGGGGACAGATGCACAGAGTGATAAAGGCAGTAGTGCTGAAAATTCAAAGAGTCAATTGCAAACTTTGCTTAATAGGGCAGGACATGAAGCACCCACATACAAGACAAGACAACTAAAAAACAACCTATTTCGTTCTATTGTAATTTTCAATGGCTTGGAGTTTGTTGGGCAACCTAGTAATAGTAAGAAGCAGGCAGAGAAAGACGCAGCTGCTGAAGCCTTGCGATGGTTGATGGGTGATAACCCGTCATTCCGGGGAGATATAGATCAACTGTCAATGTTCATGAAGAAGAGCAAGAAGAAACACGGCAAACGAACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8838.p1 GENE.R_Transcript_8838~~R_Transcript_8838.p1 ORF type:complete len:1186 (+),score=237.88,HA2|PF04408.19|2.1e-22,OB_NTP_bind|PF07717.12|5.5e-16,Helicase_C|PF00271.27|6.6e-13,dsrm|PF00035.21|2.2e-08,DEAD|PF00270.25|6.5e-07 R_Transcript_8838:171-3728(+)
MPCSSLFRPTYLRTTMSLSRPLSLLQFDRDRNTLKTLPFTRAPRLLTLRQWRPLSFRALALGPCTSSLELHNNGPPLPYWVQQNRDFGRFAYDDDEDDFSEDDYDRDSTSSSGSQLCSSTSANIDEWKWKLTMLVRNKDEQEVVSRERKDRRDFEQLSALATRMGLHSRQYAKVVVFSKVPLPNYRSDLDDKRPQREVILPLDLVKDVHFLLKKHLSQKSMSKGALPNSSISQSYDSLDKDQASYDLPEPLVEMSAAKERFLRRKSLQMRDKQCDWQSSPEGQKMLEFRKSLPAYKERDALLKAISENQVIVVSGETGCGKTTQLPQYILESEIEAACGASCSIICTQPRRISAMAVSERVAAERGEQLGESVGYKVRLEGMKGRDTRLLFCTTGVLLRRLLVDRALRGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPDLRLILMSATLNAELFSSYFGGAPTLHIPGFTYPVRAHFLENILEVTGYRLSPYNQIDDYGQEKMWKMQKQTIRKRKSQIASAVEDALEAADFSGYSRRTQDSLSCWNPDSIGFNLIEQVLSHICKSERPGAVLVFMTGWEDINTLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDRPPDGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVQPGECYHLYPRCVYDAFADYQLPELLRTPLQSLCLQIKSLQLGGISEFLSKALQAPESLSVQNAVDYLKSIGALDENENLTVLGQHLSVLPVEPKLGKMLIYGAIFRCLDPIMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSGREFSDHLALVRAYEGWKDAERQKSGHEYCWTNFLSVQTLKAIDSLRKQFFYLLKDTGLADLDKESCNMWSHDEHLVRAIICAGLFPGVSSVVIKEKSIMLKTMEDGQVLLNMNSVNAQEPKIPYPWLVFNEKVKVNAVFLRDSTAVSDSVLLLFGGKVSRGGLDGYLKMLDGYLEFFMKPALADIYLCLKRELEELIHSKLSDPKLDISSQMDLLSAVRMLVSEDLCEGRFVFGCQLPMSSKKASKGTDAQSDKGSSAENSKSQLQTLLNRAGHEAPTYKTRQLKNNLFRSIVIFNGLEFVGQPSNSKKQAEKDAAAEALRWLMGDNPSFRGDIDQLSMFMKKSKKKHGKRT*

Click here to download the sequence:
Link to NCBI Protein BLAST