Transcript Information: R_Transcript_88399.p1


Annotated TAIR IDAT5G36100.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G65090.3); Has 57 Blast hits to 49 proteins in 15 species: Archae - 0; Bacteria - 4; Metazoa - 6; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:14191711-14193654 | Reverse length=295
E-Value5.2E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.384979263291
Replicate 226.208410202738
Replicate 336.33621579953
Condition 2: 8 Hour
Replicate 126.339548385153
Replicate 223.345075584195
Replicate 329.080925465761
Condition 3: 24 Hour
Replicate 143.167144576035
Replicate 234.752564625117
Replicate 340.615564683081


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88399.p1 GENE.R_Transcript_88399~~R_Transcript_88399.p1 ORF type:complete len:568 (+),score=163.61 R_Transcript_88399:212-1915(+)
ATGGAGGATCCTAGTGAAGAGTACTGGGAGATTGAGGATTACTCTCAACCCTATGAGAGTGATGGTAAGTTAGGGTGGATATGGAGAAAAGGGCTAAGTGTGGGGAAGAAAATCGTGGTGACTGGGGTTGTGATCTCTTCGGCACCATTTGTTCTTCCTCCACTAGTAGCCTTATCTGCTATTGGGATTGCTTGCTCGTTGCCTGCTGGCTTTGTGTTTGCCACATATGCATGCACCGATAAACTTATGGACACTTTGCTTCCGATGCCTTCGCCTCCTCCTTGGCCAGAGAAGGGGACGGCATCTTTTGATGAAGAAGAGTATAGGGTGTATGCAGATGATGTTTACAAGGGGTATGAAGAATATGATGACATCGAAGCAGAGGAAAAAGAATACGAGGAAGATACGAGAAGGGGAGTTGAGATGAGGATTGAATTAGTGGAGGAAGGTTATGATAACAGAATAGACTATGGTGTAGTGCCTATCAGAGTAGATGCATTGCGTAAAAGGAAGAGATTGATTGAGATTAAAGAAGAGGGGTATGAAGAGAATTTTGATGAGATTTTGGAGAATGAGAGAGCGGATACCATTGCTGAGATACTGGAAGGGATTAGGGAAGCAGAGGATGAGATATCGTTGGAGGAAGGGGGAGAACATGAGATGCCAAAAGGTTCATTGCAGACTGTCGTAGTAGAAGCCAAAGTAGATGGGGAAAATGAGGACAATGTGGAACAAGTACTGGAGAATCTGTCATTTGTAGGAACACCAGAAACGAAAGACGAGAAAGGGCACACCAAAGGCTTCACTGACATAAATGAGGAGGAAATGAGAAGGGAGACAACAGGTTTAATTGAAGAAATGAGGGATGAGAGTAAAGAGCCCAAAATGCGAGAAAATGAGGGAAAGGAGGAATTTTCGGTGAAGGATGATCAAGATAAGCGAAACAGGAATCTGTCTGCGATTCCCGAGGAAGTAAAGCCAGATGATAATAACAGGGGAGTGATAAGTGGAACCAGAAATGGTGAGATCTCAAAGAATGCAAGTGGTGTAGGGAGTGGGGAAATGAAGCAGAAATTCAGTGAGAGGAAAGTAGATGAAAGTGTAATCCCACAAGCTGAGCCAAAGCCTGTGGTAGAAGAAAGACTGGTGGTACATGTTAAGACATCCGATGACCGTACTACTACTACTACCGATGTTCGCCAAGAGACCGTTTCAGATAGGAAGAAGACAGCAACCTTGGTCCTTTCCGATGCAGATGCGAGGGAGATGGCTGATGAAAGTGGTCTTGATTTTCTTGAACAAGGAACTATGGCAACAGGTCAAATTTCAGATTCGGCCAAGAAGAGCTCCAAAGGGAAACCACTGTCTTCAAAAAACATGGTTGATGTAAATGTTTATAAACAAGAGGTTCCAATTGAGTCAACAGCCCTGCTGTCAAAAAGTGCTGATACTGCATCGGACCGAGACATTACTGCAGGTCCTAACAAGGTGTCACCAAATGAGGAGAAGATATGGGAGCAAATCCAGGCGATGAGAACCATAGTTGGATACAGGGATGCGCCTCACTCCTCATGTTTGGAAGAGCTCAAGGCTCTTTACGTATTCACTGGAGTTGAGCCGCCAGCCTCGTCCAAGGATTCTGTTGATCTAGCAGACATTGATGAGAGGCTTCACTTTCTTATGTCCGTTATTGGTGTCAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88399.p1 GENE.R_Transcript_88399~~R_Transcript_88399.p1 ORF type:complete len:568 (+),score=163.61 R_Transcript_88399:212-1915(+)
MEDPSEEYWEIEDYSQPYESDGKLGWIWRKGLSVGKKIVVTGVVISSAPFVLPPLVALSAIGIACSLPAGFVFATYACTDKLMDTLLPMPSPPPWPEKGTASFDEEEYRVYADDVYKGYEEYDDIEAEEKEYEEDTRRGVEMRIELVEEGYDNRIDYGVVPIRVDALRKRKRLIEIKEEGYEENFDEILENERADTIAEILEGIREAEDEISLEEGGEHEMPKGSLQTVVVEAKVDGENEDNVEQVLENLSFVGTPETKDEKGHTKGFTDINEEEMRRETTGLIEEMRDESKEPKMRENEGKEEFSVKDDQDKRNRNLSAIPEEVKPDDNNRGVISGTRNGEISKNASGVGSGEMKQKFSERKVDESVIPQAEPKPVVEERLVVHVKTSDDRTTTTTDVRQETVSDRKKTATLVLSDADAREMADESGLDFLEQGTMATGQISDSAKKSSKGKPLSSKNMVDVNVYKQEVPIESTALLSKSADTASDRDITAGPNKVSPNEEKIWEQIQAMRTIVGYRDAPHSSCLEELKALYVFTGVEPPASSKDSVDLADIDERLHFLMSVIGVK*

Click here to download the sequence:
Link to NCBI Protein BLAST