Transcript Information: R_Transcript_88418.p1


Annotated TAIR IDAT5G20270.1
Annotated Gene Nameheptahelical transmembrane protein1
Annotated Gene Symbol(s)HHP1
Annotation TypeOrtholog
Chromosome Positionchr5:6841025-6842656 | Reverse length=332
E-Value9.5E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0966745284905
Replicate 22.932151679084
Replicate 33.9986823733932
Condition 2: 8 Hour
Replicate 17.6327509187173
Replicate 27.639503272425
Replicate 38.0120575556322
Condition 3: 24 Hour
Replicate 15.6106361803367
Replicate 24.2900503577682
Replicate 34.3666243764384


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88418.p1 GENE.R_Transcript_88418~~R_Transcript_88418.p1 ORF type:complete len:401 (+),score=44.53,HlyIII|PF03006.16|5.2e-69 R_Transcript_88418:3-1205(+)
ATGACAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAAAAAAAAACTCTCCCTAAAAACTTTCTGAACAAAAAAACTGGCTGCTTGTTTAGTTTTGCTATGAGTAGCAGTACTAGTAGTGCAAGGGTTGCTTGGAAGAGGAAAAAACAGGGGAAAAATATGGAAGAAAATGGCACCCATTTCCAAAAACAAACAACAAAAGGAAACAAGAAGAAATACAGGCTTTTGAACTACAATGAACTCCCAGATTACATGAAGGATAATGAGTTCATTCTCATGTATTACAGAGCAGAATGGCCTCTAAAACAAGCCCTGTTCAGCTTGTTTCAATGGCATAATGAGACCATCAATATTTGGACGCATTTGATTGCTTTTGCTCTGTTCGTGTGGTTGACTGTTGTTAATGCTGCTCATGTTCCAGAAGCTGTTGATCTCTTTGGAATTTTCAAGACATTTCCTGACAAGGGGCCAGAAACAAATGCTTCCCATTCTCATGATACTGGTAAACTCTTAATGGACGTGACAAAACTGGTAGATTGGAAGCACATAAATCATACAGGAGGATCAAATCAAGTGCACAACATGGTAGCAACAGCAGTAACAGCAGCAAGGTGGCCATTCTATGTATACTTAGCAGGTTCAATGTTCTGCCTTCTATCAAGCACAGTCTGCCATCTCTTCTGCTGTCATTCCCACCACATGAACCTCCAGCTTCTCCGATTAGACTACACAGGGATCACGGTCATGATCATTACCTCATTCTTCCCACCAATCTACTACATCTTCCAATGTGAACCCTTATGGCAAATCATTTACTTGGCTGGGATTTCAGTCTTCGGGGCCTTTACAGTTGTGACTCTCCTTTCTCCGACTCTTTCCTCAGGCAAATGCAGGGCATTTCGAGCTGTCCTGTTTGTGTCAATGGGGCTGTTCGGGTTAGTCCCTGCAATCCACGCCTGTATCTTGAACTGGACTAACCCAAGAAGGAACTTGACCCTCACGTATGAGGCTGCTATGGCCTTGTCTTACCTTATAGGGACGGGTTTCTATGTGAGCCGAATTCCTGAGAGGTGGAGACCTGGTTGGTTTGATCTTGCAGGTCATAGCCATCAGATTTTTCATGTGTTTGTCGTCTTGGGTGCCTTGGCACACTACGGTGCTGCTCTCGTCTTTATGGAGTACCGAGACAGTGTTGGCTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88418.p1 GENE.R_Transcript_88418~~R_Transcript_88418.p1 ORF type:complete len:401 (+),score=44.53,HlyIII|PF03006.16|5.2e-69 R_Transcript_88418:3-1205(+)
MTKKKKKTKKKKKKKTLPKNFLNKKTGCLFSFAMSSSTSSARVAWKRKKQGKNMEENGTHFQKQTTKGNKKKYRLLNYNELPDYMKDNEFILMYYRAEWPLKQALFSLFQWHNETINIWTHLIAFALFVWLTVVNAAHVPEAVDLFGIFKTFPDKGPETNASHSHDTGKLLMDVTKLVDWKHINHTGGSNQVHNMVATAVTAARWPFYVYLAGSMFCLLSSTVCHLFCCHSHHMNLQLLRLDYTGITVMIITSFFPPIYYIFQCEPLWQIIYLAGISVFGAFTVVTLLSPTLSSGKCRAFRAVLFVSMGLFGLVPAIHACILNWTNPRRNLTLTYEAAMALSYLIGTGFYVSRIPERWRPGWFDLAGHSHQIFHVFVVLGALAHYGAALVFMEYRDSVGC*

Click here to download the sequence:
Link to NCBI Protein BLAST