Transcript Information: R_Transcript_88496.p1


Annotated TAIR IDAT3G23940.1
Annotated Gene Namedehydratase family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:8648780-8652323 | Forward length=608
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8263194547935
Replicate 23.0320744389996
Replicate 33.9482109831878
Condition 2: 8 Hour
Replicate 14.0683036480671
Replicate 24.3055114104146
Replicate 34.5660883858737
Condition 3: 24 Hour
Replicate 16.951509952488
Replicate 24.4179012373983
Replicate 35.8457844815937


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88496.p1 GENE.R_Transcript_88496~~R_Transcript_88496.p1 ORF type:complete len:644 (+),score=112.17,ILVD_EDD|PF00920.17|3.9e-207 R_Transcript_88496:915-2846(+)
ATGGTTATGTTGTGTGTACACTACACAGTTAGTAGCACCTTTTCAGCATTACCATGCAATGTAAGATCAGCGGATATGCAAGCCTCGCTCATAAACCCTAGTGTAAACTTAAACCTTACAACCCACAGTGTCTCGAAAAGAAGAGTAATTCCCCAATGCTGTATCCCTCATAGATGTAATTCTATAACTGCTTCATCTGTACCTTCAACCCCAACAACTGAACCACCACCACCTACTGTGACATCAAAATCAGCACATAAACTCAACAAGTACAGCTCTCGGATCACCGACCCTAAGACTCAAGGCGCTTCCCAAGCTATCCTTTATGGGGTAGGACTGTCTGATGAAGATATGCACAAACCCCAGGTTGGGATTTCAGCTGTTTGGTATGAAGGTAATACTTGTAACATGCATTTGTTAAGCTTGTCAGAAGCTGTCAAGGAAGGTGTTCGAGATACTGGGATGATTGGATTTAGATTTAACACTATTGGTGTTAGTGATGCTATCTCAATGGGTACTAGGGGAATGTGTTATAGCTTGCAGTCCCGCGATTTGATTGCAGATAGTATTGAGACTGTTATGTCCGCGCAGTGGTATGATGGCAACATCTCCATTCCTGGGTGTGACAAAAATATGCCAGGTACAATCATGGCTATGGGACGCATTAATAGACCAAGTATCATGATATATGGTGGTACGATCAAGCCTGGTCATCTTCAAGGAAACACCTTTGACATAGCAAATGCTTTAGAGTGTTATGGTGAATATGTTAGTGGAGCGATTAGTGATGAGCACAGAATGGATATCATCCAAAATGCATGTCCTGGAGCAGGGGCTTGTGGTGGCATGTATACAGCTAATACCATGGCATCCGCAATTGAGACTATGGGGATGACTCTTCCTTACAGCTCTTCAACGCCTGATGAAGACCCTCTGAAATTGGACGAGTGCCGTCTTGCTGGAAGGTATCTGCTTGATTTGCTTAAGATGGACTTGAAACCTCGAGACATAATCACGGAGAATTCATTGCGGAATGCAATGGTTATGGTCATGGCTCTTGGTGGGTCAACCAATGCTGTTTTGCATTTGATTGCCATTGCTAGGTCTGTTGGTCTGGACTTGACAATTGATGGCTTTCTGAAGGTTAGTGATGAGGTTCCACTTCTTGCAGATCTCAAGCCAAGCGGTAAATATGTCATGGAAGATCTACACAAGATTGGTGGGACACCTGCAGTGATCCGTCACCTTCTTGAGTTGGGGTTCTTGCATGGGGATTGTATTACTGTTACTGGTAAAACATTGGCTGACAATGCTAAGCTTTTCCCTTCACTAGCCGAGGGTCAGCAAATAATACGACCTCCATCAAACCCCATTAAAAAGACAGGTCATATCCAGATATTGTATGGTAAACTAGCTCCAGAGGGCTCTGTAGCTAAAATTACAGGAAAAGAGGGCTTGTATTTTTCTGGTCCTGCGCTTGTTTTTGAAGGAGAAGAAGCTATGATAAGCGCCATTTCGGAGAACCCTCTGAGTTTTAAGGGGAAAGTGGTGGTCATTCGAGGAGAGGGCCCTAAAGGTGGACCAGGTATGCCTGAAATGTTAACGCCAACTAGTGCCATAGTAGGAGCAGGGCTTGGAAAGGATGTGGCGTTGCTTACTGATGGAAGGTTTTCAGGAGCTTCACATGGCTTCGTGATAGGTCATGTGTGCCCTGAAGCACAAGAGGGTGGATCAATTGCCTTCGTTCAAAATGGAGACATAATCATCATTGATGTTCCTAAGAGAAGAATGGATGTTCAGTTGACAGATACTGAACTGGAGGAGCGAAGAAAGAAATGGATCCCGTCTCCATATAAGGCTAACAGAGGAGTTCTGTACAAGTACATCAAGAACGTGCAGTCGGCTTCAAATGGTTGCGTCACTGATGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88496.p1 GENE.R_Transcript_88496~~R_Transcript_88496.p1 ORF type:complete len:644 (+),score=112.17,ILVD_EDD|PF00920.17|3.9e-207 R_Transcript_88496:915-2846(+)
MVMLCVHYTVSSTFSALPCNVRSADMQASLINPSVNLNLTTHSVSKRRVIPQCCIPHRCNSITASSVPSTPTTEPPPPTVTSKSAHKLNKYSSRITDPKTQGASQAILYGVGLSDEDMHKPQVGISAVWYEGNTCNMHLLSLSEAVKEGVRDTGMIGFRFNTIGVSDAISMGTRGMCYSLQSRDLIADSIETVMSAQWYDGNISIPGCDKNMPGTIMAMGRINRPSIMIYGGTIKPGHLQGNTFDIANALECYGEYVSGAISDEHRMDIIQNACPGAGACGGMYTANTMASAIETMGMTLPYSSSTPDEDPLKLDECRLAGRYLLDLLKMDLKPRDIITENSLRNAMVMVMALGGSTNAVLHLIAIARSVGLDLTIDGFLKVSDEVPLLADLKPSGKYVMEDLHKIGGTPAVIRHLLELGFLHGDCITVTGKTLADNAKLFPSLAEGQQIIRPPSNPIKKTGHIQILYGKLAPEGSVAKITGKEGLYFSGPALVFEGEEAMISAISENPLSFKGKVVVIRGEGPKGGPGMPEMLTPTSAIVGAGLGKDVALLTDGRFSGASHGFVIGHVCPEAQEGGSIAFVQNGDIIIIDVPKRRMDVQLTDTELEERRKKWIPSPYKANRGVLYKYIKNVQSASNGCVTDE*

Click here to download the sequence:
Link to NCBI Protein BLAST