Transcript Information: R_Transcript_88521.p1


Annotated TAIR IDAT5G53850.2
Annotated Gene Namehaloacid dehalogenase-like hydrolase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21861155-21864817 | Reverse length=507
E-Value3.5E-285
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.979463380257
Replicate 217.384460458107
Replicate 318.489937530354
Condition 2: 8 Hour
Replicate 119.718295779823
Replicate 223.544444585143
Replicate 324.362275123771
Condition 3: 24 Hour
Replicate 125.952303822622
Replicate 223.30602971613
Replicate 330.824839303854


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88521.p1 GENE.R_Transcript_88521~~R_Transcript_88521.p1 ORF type:complete len:529 (+),score=108.69,Aldolase_II|PF00596.17|2.1e-39,Aldolase_II|PF00596.17|8.3e+03,HAD_2|PF13419.2|6e+03,HAD_2|PF13419.2|3.2e-21 R_Transcript_88521:222-1808(+)
ATGTCGTTTGCAGCACCAGTAGTAGCAGTGAACGGGGTGAAAATGGCAGCATCAACAACAACACAAGCTTATTTGGAGACCAAAGCAGTTCAAGAAGCCAAAGCCTTATGCACAGAGCTTTGCCGTCAATTCTATCATCTTGGTTGGGTTGGGGGCACTGGTGGTAGCATTACCCTTAAAGTTCATGATGATTCCATTCCTAAAAAGGAACAACTTATCATCATGTCTCCTTCTGGAGTTCAGAAGGAAAGGATGTTGCCAGAGGACATGTATGTGCTTTCTTCAGATGGGTCCATAGTAGCTTCACCAACTCCTAAACCGTACCCCCATAAGCCGCCCAAGTGTTCCGACTGTGGCCCTCTCTTCATGAAGGCATATACGATGCGTCATGCTGGAGCTGTCATACACAGTCATGGGATGGAGAGTTGTCTAGCAACAATGATGTATCCAACATTGAAAGAGTTTCGAATCACTCATATGGAAATGATTAAAGGAATTCAAGGGCATGGTTACTATGATGAGCTTGTGGTTCCAATCATAGAGAATTCAGCGCATGAGCGAGATCTCACAGATGCGCTAGCTGCGGCTATTGAAGCTTATCCGAAGACAACAGCTGTGCTCGTCCGAAACCATGGCATCTATGTGTGGGGGGACTCATGGATTAGTGCAAAGACCCAGGCTGAATGTTACCATTACCTGTTTGATGCTGCTATTAAACTTTATCAAATGGGGATGGACTGGACTACTCCAGCCCATGGTCCTATCAAGAGACTTAAAGGAGCTCCAAACACTGATGAAAGCAGAGCTGTATCAACTAAAGTTGGGACTTCAGATTCGAATCCTGTGGAGCCTTCTCGACGTTGCATTGTTCTTGACATTGAAGGGACTACTACTCCAATATCGTTTGTTACTGATGTTCTTTTTCCATTTGCTCGCGATAATGTTGGAAGGCATTTGAGTTCAACATATGACTCTCCAGAAACTCAAGATGATATTAAGTTGCTGCGTGCTCAAGTTCAGGAGGATCTCAAAGCGGGTATTGCTGGCGCTATTCCAGTTCCCTCAGATGAAGAGGGGAAAGAGGAAGTTATTGCAGCCTTGGTTGCCAATGTGGAGGCCATGATTAAAGCTGACAGGAAAATCACTGCACTCAAGCAACTGCAGGGCCACATATGGAGAACTGGATTCCAGAATAAGGAACTGGAGGGTGTAGTATTTGAAGATGTCCCAGAGGCTCTTGAGAGGTGGCATGCTTCAGGAATTAAAGTCTATATATATTCTAGTGGCAGCAGGCTTGCCCAGAGGCTGATTTTTGGAAACACCTCGTATGGGGATCTAAGGAAATATCTATCCGGATTTTTCGATACCATGGTGGGGAACAAGAGAGAGACGCGCAGTTATGTCGAAATATCCCAGTCAGTTGGGGTAGATGACCCATCTGAGATACTATTTGTAACGGATGTCTATCAAGAAGCTACAGCTGCAAAGGCAGCAGGCTTGGAAGTCGTAATTTCGGTGCGGCCTGGGAATGGACCTCTACCCGAGAATCATGGGTTCAAGACAGTAAATTCATTTTCAGAAATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88521.p1 GENE.R_Transcript_88521~~R_Transcript_88521.p1 ORF type:complete len:529 (+),score=108.69,Aldolase_II|PF00596.17|2.1e-39,Aldolase_II|PF00596.17|8.3e+03,HAD_2|PF13419.2|6e+03,HAD_2|PF13419.2|3.2e-21 R_Transcript_88521:222-1808(+)
MSFAAPVVAVNGVKMAASTTTQAYLETKAVQEAKALCTELCRQFYHLGWVGGTGGSITLKVHDDSIPKKEQLIIMSPSGVQKERMLPEDMYVLSSDGSIVASPTPKPYPHKPPKCSDCGPLFMKAYTMRHAGAVIHSHGMESCLATMMYPTLKEFRITHMEMIKGIQGHGYYDELVVPIIENSAHERDLTDALAAAIEAYPKTTAVLVRNHGIYVWGDSWISAKTQAECYHYLFDAAIKLYQMGMDWTTPAHGPIKRLKGAPNTDESRAVSTKVGTSDSNPVEPSRRCIVLDIEGTTTPISFVTDVLFPFARDNVGRHLSSTYDSPETQDDIKLLRAQVQEDLKAGIAGAIPVPSDEEGKEEVIAALVANVEAMIKADRKITALKQLQGHIWRTGFQNKELEGVVFEDVPEALERWHASGIKVYIYSSGSRLAQRLIFGNTSYGDLRKYLSGFFDTMVGNKRETRSYVEISQSVGVDDPSEILFVTDVYQEATAAKAAGLEVVISVRPGNGPLPENHGFKTVNSFSEI*

Click here to download the sequence:
Link to NCBI Protein BLAST