Transcript Information: R_Transcript_8853.p1


Annotated TAIR IDAT3G54500.3
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.1).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:20175792-20178482 | Reverse length=669
E-Value6E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.0445430370435
Replicate 23.1630007800736
Replicate 35.5870091697933
Condition 2: 8 Hour
Replicate 15.866771084921
Replicate 26.5446483437616
Replicate 36.9012579833609
Condition 3: 24 Hour
Replicate 17.8063132180285
Replicate 24.5882532842664
Replicate 37.3482394501205


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8853.p1 GENE.R_Transcript_8853~~R_Transcript_8853.p1 ORF type:complete len:697 (+),score=169.99 R_Transcript_8853:35-2125(+)
ATGAAAAAAATGGAAGAGCTTTTCAACCGCGAAAGAAAAGCTATTGATGATTTGCTAGATATTGCCAAGCTAGAAAACATTATATGGGGTGAGTGTAGTGTGGATGATGATCATATTGTGCCTTATCCTGAAGATGTTGACAAAAAGGATCTGCCAGATTATGCGGATAATAATGATGTAAAGAAGTTGAATGAGGAAGGTATACAAAGCAAAGCTGAAGAACAACGCACTGCTGCTTCAAAGTCAAATTCAGGTGGGGGTAAACAAGAGAAAAATGATGGCCTTTCTGCTTCAGGAGTTATAGTCGATCCTCAACTTGATAAGGAAAATCAGCTAAATATTGGTCCTGCGATATCCCAAAATCAGCATGACGACAAGGAGCTAGGTGAACTTGTTGGCAACAGTTGGGCTAATATTGGAAGTTTTGACGATCTTGATCGCATATTCAGCCATAAGGACTTGGATGGCCAGACTAGTCTTGGTAGTGCAGATGATTTATGGCCATCATCTAAAGACTTGATCAGTGAGGAAGCTAAGTCCTCCTCCCAAGCTTTGAGTTCAACAAGTTGGGAACTTGGAGCGCTAGGAAACAAATCTGCTCACTTTCAGATCAGTTCCGAGTATCTGCATCATGACAACAACTCTTTATCACAAGGCTGTCAAAAGACAGATGCCATTTCATTCTCCGAACAGATTATTGGTAGACGCGTGGAACAAGAAGAATATGCTGCGGGTACAACAAGCTTGGTCAAGGAAAAGAGAGCTCCAGGCATCACTGTGAATACATCATTGGATTCTCACCTTGCTTCTGAAAATGTTACAAACAAAAAAAAGCTAGGAGATAAGGTGAATTGGTCCAAGAATCAATTACAACACGTCCAGAGAACTGACAAGATAGCTGAGTCTAGACTCGTACGGGATACATATGACACATGGCCATCTGCTGCAAATGTTCCAAAATTTGACGACCAATGTGCCCCAGCCACTGTACAAAATTATCCAGCTTCTGGCTCCAGTCAAAAACAGCTGCCACAAGACTCAAGTTCTATGGAATACCAGCCTTTTTCAAATCCATATGTTGCTTCTTGTGCTTATGGGAATGTAGCTAATAAGCATCCAGCCATGCACATCATAAAGCCTACAGATGATGAGCATCAGTCTATGCTCTCAAACTCCGAAACTTTTGATGTAATTTCTGGGAACAAGCCTGGGGAGACTCCTGCTGCACCAGTGATCATGACTCCTCAAGAGAAGATTGAGAAGTTGAGGAGGCGTCAACAGATGCGTGCAATACTTGCTATACAGAAGCAACAGCAGCAGTTTGGTCACCAAGCCACCAATGTTGATTATACTCTTTCCCAGAAGAGCTGCGCAGAGGATAACGTCCTGCGTATGGAAAAGGCTGACTTGGAAGCTGATGAGAACTTGAGCATTCTTCCATGCTATGATCCAAGTACACCAAATAAAAGGGATGATTCTAGTACGATATCTGATATTGATGAGTATTCAGCAGAGGACACAGTCCTTTACCTGCTTCAAGATGTTATCTCAAGATTGGATTTGGAGATAAGGTTGTGCGTAAGAGACAGCTTGTATAGATTGGCTCATAGTTCAATGCAAAGGAGTTATGCAAATGATAAAAGCAGCACAAACAGGAGCGGTACCTATGACATTGCCAAGGAAGAGACGAGCAGTAGTGACAGGTTTGCTGGAAAGGTAAATATGGAGACCGAGACCAACCACATAGACCGAATTGTAGCTCATTTGCTATTTCATCGGCCTTTTAAATTGCCTGTGAAACATGTTGAGACACCAGAGTCATCCACATCCACCAAGCTCTCACTTGGACAAGAAACAGCTTCTCCAAGCAGCTTGCCAGTTGGTTTCCTGAGCAAGAGCTCCAAAAATGAATATAATCTCTCTCCTCGTGGATTAAAAACTTCTCAGCCATTTGTGGATTCCGGTGATGAAGATATCTTGAAAGATAATCCTCAAAGAGAGACTCGGTTCAATCCACAAATGAAAGGGAAGACGGAAAGCTTGCAAGGTCTGAACATTCTTGACAATGGAGCAGATTTCAATCATGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8853.p1 GENE.R_Transcript_8853~~R_Transcript_8853.p1 ORF type:complete len:697 (+),score=169.99 R_Transcript_8853:35-2125(+)
MKKMEELFNRERKAIDDLLDIAKLENIIWGECSVDDDHIVPYPEDVDKKDLPDYADNNDVKKLNEEGIQSKAEEQRTAASKSNSGGGKQEKNDGLSASGVIVDPQLDKENQLNIGPAISQNQHDDKELGELVGNSWANIGSFDDLDRIFSHKDLDGQTSLGSADDLWPSSKDLISEEAKSSSQALSSTSWELGALGNKSAHFQISSEYLHHDNNSLSQGCQKTDAISFSEQIIGRRVEQEEYAAGTTSLVKEKRAPGITVNTSLDSHLASENVTNKKKLGDKVNWSKNQLQHVQRTDKIAESRLVRDTYDTWPSAANVPKFDDQCAPATVQNYPASGSSQKQLPQDSSSMEYQPFSNPYVASCAYGNVANKHPAMHIIKPTDDEHQSMLSNSETFDVISGNKPGETPAAPVIMTPQEKIEKLRRRQQMRAILAIQKQQQQFGHQATNVDYTLSQKSCAEDNVLRMEKADLEADENLSILPCYDPSTPNKRDDSSTISDIDEYSAEDTVLYLLQDVISRLDLEIRLCVRDSLYRLAHSSMQRSYANDKSSTNRSGTYDIAKEETSSSDRFAGKVNMETETNHIDRIVAHLLFHRPFKLPVKHVETPESSTSTKLSLGQETASPSSLPVGFLSKSSKNEYNLSPRGLKTSQPFVDSGDEDILKDNPQRETRFNPQMKGKTESLQGLNILDNGADFNHD*

Click here to download the sequence:
Link to NCBI Protein BLAST