Transcript Information: R_Transcript_88536.p1


Annotated TAIR IDAT1G22500.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7949581-7950726 | Forward length=381
E-Value3E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.19113048120124
Replicate 21.0992827443088
Replicate 30.95944450664513
Condition 2: 8 Hour
Replicate 10
Replicate 20.46829071918713
Replicate 30.76027688462354
Condition 3: 24 Hour
Replicate 10.48079177440218
Replicate 20.34641767890959
Replicate 30.57297656248422


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88536.p1 GENE.R_Transcript_88536~~R_Transcript_88536.p1 ORF type:complete len:191 (+),score=10.92,zf-RING_11|PF17123.1|3.4e-08 R_Transcript_88536:579-1151(+)
ATGAAGAGCCACCCAAAAGTATCCGCCATTTGTGTAGTTATCGTCGAGGTGATTCTATGTCTCCTTATCTATCTTGTCTTTCTCTGCTTTCGTCGTAGACGATGTCGAGAAGATATCCTTCCATCTCGGACATCTGACTACACCGAGACCCAGACAGGTCCCGGTGAGTCCATTTTGATCTTCTTCCCTTACTCAGTCATCAAGAGCTTGTACCCCCAAGTTGAAAAGGCGCTAAGCACTTTACAATGCGCTGCGTGTCTTGAAGAGTTCAAGGAAGACCATGACGAGACGCTGCGTTTTATCCCTAAGTGCGGTCATGTGTTTCATACCAAGTGTGCTGACCCTTGTGCCGTTTTGTGCCCTTGCTGCTGGGCCAACAGGCCCACCTTAGGGCCCAAGAACTGCGGTGATCATGACAATGGTGGTGGTGATGGTGAGGAAGTGGTGGTGCAAATTGTAGAAAAGGAACCCGTGATAAAATTACCAGATGAGGTACGAGAGAAAATCACGGTGCATGGAAAATTGGTGCTGCCTAGATGGGAGCCGTCTTCGCCAGCCGGGTACCGGTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88536.p1 GENE.R_Transcript_88536~~R_Transcript_88536.p1 ORF type:complete len:191 (+),score=10.92,zf-RING_11|PF17123.1|3.4e-08 R_Transcript_88536:579-1151(+)
MKSHPKVSAICVVIVEVILCLLIYLVFLCFRRRRCREDILPSRTSDYTETQTGPGESILIFFPYSVIKSLYPQVEKALSTLQCAACLEEFKEDHDETLRFIPKCGHVFHTKCADPCAVLCPCCWANRPTLGPKNCGDHDNGGGDGEEVVVQIVEKEPVIKLPDEVREKITVHGKLVLPRWEPSSPAGYRS*

Click here to download the sequence:
Link to NCBI Protein BLAST