Transcript Information: R_Transcript_88537.p1


Annotated TAIR IDAT3G05200.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)ATL6
Annotation TypeHomolog
Chromosome Positionchr3:1477377-1478573 | Forward length=398
E-Value4E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.268922419312
Replicate 20.22455936274116
Replicate 30.97996738379262
Condition 2: 8 Hour
Replicate 10
Replicate 21.6740767153829
Replicate 30.97067436472658
Condition 3: 24 Hour
Replicate 10.49107609043217
Replicate 20.70765536547307
Replicate 31.2875120404057


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88537.p1 GENE.R_Transcript_88537~~R_Transcript_88537.p1 ORF type:complete len:187 (+),score=11.69,zf-RING_11|PF17123.1|3.3e-08 R_Transcript_88537:579-1139(+)
ATGAAGAGCCACCCAAAAGTATCCGCCATTTGTGTAGTTATCGTCGAGGTGATTCTATGTCTCCTTATCTATCTTGTCTTTCTCTGCTTTCGTCGTAGAAGATGTCGAGAAGATGTCCTTCCATCTCGGACATCTCACTACACCGGTCGCGATGAGTCTATTTTGATCTTCTTTCCTTACTCCGTCATCAAGAGCTTGTCCCCCCAACTTGAAAAAGCGCTAAGCAGTTTACAATGCGCTGCGTGTCTTGAAGAGTTCAAGGAAGACCATGACGAGACGCTGCGTTTTATCCCTAAGTGCGGTCATGTGTTTCATACCAAGTGTGCTGACCCTTGTGCCGTTCTTTGTCCTTGTTGCTGGGCCTCCAGGCCCAGCTTAGGGCCCAAGAACGGCGGTGATCATGACAATGGTGGTGGTGATGGTGAGGAAGTGGTGGTGCAAATTGTAGAAAAGGAACCCGTGATAAAATTACCAGATGAGGTACGAGAGAAAATCACGGTGCATGGAAAATTGGTGCTGCCTAGATGGGAGCCGTCTTCGCCAGCCGGGTACCGGGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88537.p1 GENE.R_Transcript_88537~~R_Transcript_88537.p1 ORF type:complete len:187 (+),score=11.69,zf-RING_11|PF17123.1|3.3e-08 R_Transcript_88537:579-1139(+)
MKSHPKVSAICVVIVEVILCLLIYLVFLCFRRRRCREDVLPSRTSHYTGRDESILIFFPYSVIKSLSPQLEKALSSLQCAACLEEFKEDHDETLRFIPKCGHVFHTKCADPCAVLCPCCWASRPSLGPKNGGDHDNGGGDGEEVVVQIVEKEPVIKLPDEVREKITVHGKLVLPRWEPSSPAGYRA*

Click here to download the sequence:
Link to NCBI Protein BLAST