Transcript Information: R_Transcript_8854.p1


Annotated TAIR IDAT3G54500.3
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.1).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:20175792-20178482 | Reverse length=669
E-Value1E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1608074127925
Replicate 23.5931168867177
Replicate 33.9882266350444
Condition 2: 8 Hour
Replicate 14.8097234717803
Replicate 25.0578185116967
Replicate 36.5907633800215
Condition 3: 24 Hour
Replicate 15.7736152105387
Replicate 23.5117748531128
Replicate 35.3742132043721


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8854.p1 GENE.R_Transcript_8854~~R_Transcript_8854.p1 ORF type:complete len:672 (+),score=160.27 R_Transcript_8854:399-2414(+)
ATGTTTGATTGGGACGACCAAGAGCTAGCAAACATAATATGGGGTGAGAGTAGTGTGGCTGATGATCATATTGTGCCTTATCCTGAAGATGTTGACAAAAAGGATCTGCCAGATTATGCGGATAATAATGATGTAAAGAAGTTGAATGAGGAAGGTATACAAAGCAAAGCTGAAGAACAACGCACTGCTGCTTCAAAGTCAAATTCAGGTGGGGGTAAACAAGAGAAAAATGATGGCCTTTCTGCTTCAGGAGTTATAGTCGATCCTCAACTTGATAAGGAAAATCAGCTAAATATTGGTCCTGCGATATCCCAAAATCAGCATGACGACAAGGAGCTAGGTGAACTTGTTGGCAACAGTTGGGCTAATATTGGAAGTTTTGACGATCTTGATCGCATATTCAGCCATAAGGACTTGGATGGCCAGACTAGTCTTGGTAGTGCAGATGATTTATGGCCATCATCTAAAGACTTGATCAGTGAGGAAGCTAAGTCCTCCTCCCAAGCTTTGAGTTCAACAAGTTGGGAACTTGGAGCGCTAGGAAACAAATCTGCTCACTTTCAGATCAGTTCCGAGTATCTGCATCATGACAACAACTCTTTATCACAAGGCTGTCAAAAGACAGACGCCATTTCATACTCCCAACGGAATATTGGTAGATGCGTGGAACAAGAAGAATACGCTGCGGGTACAACAAGCTTGGTCAAGGAAAAGAGAGCTCCAGGCATCACTGTGAATACGTCATTGGATCCTCACCTTGCTTCTGAAAATATTACAAACAAAAACAAGCTAGGAGATAAGGTGAATTGGTCCAAGAATCAATTAAAACACGTCCAGAGAACTGAGAAGGTAACTGATTCTAGACTCGTACGGGATACATATGACACATGGCCATCTGCTGCAAATGTTCCAAAATTTGACGACCAATGTGCCCCAGCCACTGTACAAAATTATCCAGCTTCTGGCTCCAGTCAAAAACAGCTGCCACAAGACTCAAGTTCTATGGAATACCAGCCTTTTTCAAATCCATATGTTGCTTCTTGTGCTTATGGGAATGTAGCTAATAAGCATCCAGCCATGCACATCATAAAGCCTACAGATGATGAGCATCAGTCTATGCTCTCAAACTCCGAAACTTTTGATGTAATTTCTGGGAACAAGCCTGGGGAGACTCCTGCTGCACCAGTGATCATGACTCCTCAAGAGAAGATTGAGAAGTTGAGGAGGCGTCAACAGATGCGTGCAATACTTGCTATACAGAAGCAACAGCAGCAGTTTGGTCACCAAGCCACCAGTGTTGATCATACTCTTTCACAGAAGAGCTGCACAGAGGATAACGTACTGCGAATGGAAAAGGCTGACTTGGAAGCTGATGAGAACTTGAGCATTCTTCCATGCTATGATCCAAGTACCCTAAATAAAAGGGAGGATTCTGGTACAATATCTGATATTGATGAGTACTCAGCAGAGGACACAGTCCTTTACCTGCTTCAAGATGTTATCTCAAGATTGGATTTGGAGATAAGGTTGTGCGTAAGAGACAGCTTGTATAGATTGGCTCATAGTTCAATGCAAAGGAGTTATGCAAATGATAAAAGCAGCACAAACAGGAGCGGTACCTATGACATTGCCAAGGAAGAGACGAGCAGTAGTGACAGGTTTGCTGGAAAGGTAAATATGGAGACCGAGACCAACCACATAGACCGAATTGTAGCTCATTTGCTATTTCATCGGCCTTTTAAATTGCCTGTGAAACATGTTGAGACACCAGAGTCATCCACATCCACCAAGCTCTCACTTGGACAAGAAACAGCTTCTCCAAGCAGCTTGCCAGTTGGTTTCCTGAGCAAGAGCTCCAAAAATGAATATAATCTCTCTCCTCGTGGATTAAAAACCTCTCACCCATTTGTGGATTCTGGTGACGAAGATATCTTGAAAGACAATCCTCAAAGAGAGACTCGGTTTGATCCACAAATGAAGGGGAAGATGGAAAGCCTGCAAGCTGAACATTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8854.p1 GENE.R_Transcript_8854~~R_Transcript_8854.p1 ORF type:complete len:672 (+),score=160.27 R_Transcript_8854:399-2414(+)
MFDWDDQELANIIWGESSVADDHIVPYPEDVDKKDLPDYADNNDVKKLNEEGIQSKAEEQRTAASKSNSGGGKQEKNDGLSASGVIVDPQLDKENQLNIGPAISQNQHDDKELGELVGNSWANIGSFDDLDRIFSHKDLDGQTSLGSADDLWPSSKDLISEEAKSSSQALSSTSWELGALGNKSAHFQISSEYLHHDNNSLSQGCQKTDAISYSQRNIGRCVEQEEYAAGTTSLVKEKRAPGITVNTSLDPHLASENITNKNKLGDKVNWSKNQLKHVQRTEKVTDSRLVRDTYDTWPSAANVPKFDDQCAPATVQNYPASGSSQKQLPQDSSSMEYQPFSNPYVASCAYGNVANKHPAMHIIKPTDDEHQSMLSNSETFDVISGNKPGETPAAPVIMTPQEKIEKLRRRQQMRAILAIQKQQQQFGHQATSVDHTLSQKSCTEDNVLRMEKADLEADENLSILPCYDPSTLNKREDSGTISDIDEYSAEDTVLYLLQDVISRLDLEIRLCVRDSLYRLAHSSMQRSYANDKSSTNRSGTYDIAKEETSSSDRFAGKVNMETETNHIDRIVAHLLFHRPFKLPVKHVETPESSTSTKLSLGQETASPSSLPVGFLSKSSKNEYNLSPRGLKTSHPFVDSGDEDILKDNPQRETRFDPQMKGKMESLQAEHS*

Click here to download the sequence:
Link to NCBI Protein BLAST