Transcript Information: R_Transcript_8856.p1


Annotated TAIR IDAT3G54500.3
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.1).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20175792-20178482 | Reverse length=669
E-Value2.6E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0167444017121
Replicate 23.0802955700557
Replicate 32.7433218678027
Condition 2: 8 Hour
Replicate 11.8694298088466
Replicate 23.0461680352513
Replicate 32.7173069790998
Condition 3: 24 Hour
Replicate 13.4024295142855
Replicate 23.7639214274338
Replicate 33.2438364730581


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8856.p1 GENE.R_Transcript_8856~~R_Transcript_8856.p1 ORF type:complete len:668 (+),score=162.00 R_Transcript_8856:35-2038(+)
ATGAAAAAAATGGAAGAGCTTTTCAACCGCGAAAGAAAAGCTATTGATGATTTGCTAGATATTGCCAAGCTAGAAAACATTATATGGGGTGAGTGTAGTGTGGATGATGATCATATTGTGCCTTATCCTGAAGATGTTGACAAAAAGGATCTGCCAGATTATGCGGATAATAATGATGTAAAGAAGTTGAATGAGGAAGGTATACAAAGCAAAGCTGAAGAACAACGCACTGCTGCTTCAAAGTCAAATTCAGGTGGGGGTAAACAAGAGAAAAATGATGGCCTTTCTGCTTCAGGAGTTATAGTCGATCCTCAACTTGATAAGGAAAATCAGCTAAATATTGGTCCTGCGATATCCCAAAATCAGCATGACGACAAGGAGCTAGGTGAACTTGTTGGCAACAGTTGGGCTAATATTGGAAGTTTTGACGATCTTGATCGCATATTCAGCCATAAGGACTTGGATGGCCAGACTAGTCTTGGTAGTGCAGATGATTTATGGCCATCATCTAAAGACTTGATCAGTGAGGAAGCTAAGTCCTCCTCCCAAGCTTTGAGTTCAACAAGTTGGGAACTTGGAGCGCTAGGAAACAAATCTGCTCACTTTCAGATCAGTTCCGAGTATCTGCATCATGACAACAACTCTTTATCACAAGGCTGTCAAAAGACAGATGCCATTTCATTCTCCGAACAGATTATTGGTAGACGCGTGGAACAAGAAGAATATGCTGCGGGTACAACAAGCTTGGTCAAGGAAAAGGTGAATTGGTCCAAGAATCAATTACAACACGTCCAGAGAACTGACAAGATAGCTGAGTCTAGACTCGTACGGGATACATATGACACATGGCCATCTGCTGCAAATGTTCCAAAATTTGACGACCAATGTGCCCCAGCCACTGTACAAAATTATCCAGCTTCTGGCTCCAGTCAAAAACAGCTGCCACAAGACTCAAGTTCTATGGAATACCAGCCTTTTTCAAATCCATATGTTGCTTCTTGTGCTTATGGGAATGTAGCTAATAAGCATCCAGCCATGCACATCATAAAGCCTACAGATGATGAGCATCAGTCTATGCTCTCAAACTCCGAAACTTTTGATGTAATTTCTGGGAACAAGCCTGGGGAGACTCCTGCTGCACCAGTGATCATGACTCCTCAAGAGAAGATTGAGAAGTTGAGGAGGCGTCAACAGATGCGTGCAATACTTGCTATACAGAAGCAACAGCAGCAGTTTGGTCACCAAGCCACCAATGTTGATTATACTCTTTCCCAGAAGAGCTGCGCAGAGGATAACGTCCTGCGTATGGAAAAGGCTGACTTGGAAGCTGATGAGAACTTGAGCATTCTTCCATGCTATGATCCAAGTACACCAAATAAAAGGGATGATTCTAGTACGATATCTGATATTGATGAGTATTCAGCAGAGGACACAGTCCTTTACCTGCTTCAAGATGTTATCTCAAGATTGGATTTGGAGATAAGGTTGTGCGTAAGAGACAGCTTGTATAGATTGGCTCATAGTTCAATGCAAAGGAGTTATGCAAATGATAAAAGCAGCACAAACAGGAGCGGTACCTATGACATTGCCAAGGAAGAGACGAGCAGTAGTGACAGGTTTGCTGGAAAGGTAAATATGGAGACCGAGACCAACCACATAGACCGAATTGTAGCTCATTTGCTATTTCATCGGCCTTTTAAATTGCCTGTGAAACATGTTGAGACACCAGAGTCATCCACATCCACCAAGCTCTCACTTGGACAAGAAACAGCTTCTCCAAGCAGCTTGCCAGTTGGTTTCCTGAGCAAGAGCTCCAAAAATGAATATAATCTCTCTCCTCGTGGATTAAAAACTTCTCAGCCATTTGTGGATTCCGGTGATGAAGATATCTTGAAAGATAATCCTCAAAGAGAGACTCGGTTCAATCCACAAATGAAAGGGAAGACGGAAAGCTTGCAAGGTCTGAACATTCTTGACAATGGAGCAGATTTCAATCATGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8856.p1 GENE.R_Transcript_8856~~R_Transcript_8856.p1 ORF type:complete len:668 (+),score=162.00 R_Transcript_8856:35-2038(+)
MKKMEELFNRERKAIDDLLDIAKLENIIWGECSVDDDHIVPYPEDVDKKDLPDYADNNDVKKLNEEGIQSKAEEQRTAASKSNSGGGKQEKNDGLSASGVIVDPQLDKENQLNIGPAISQNQHDDKELGELVGNSWANIGSFDDLDRIFSHKDLDGQTSLGSADDLWPSSKDLISEEAKSSSQALSSTSWELGALGNKSAHFQISSEYLHHDNNSLSQGCQKTDAISFSEQIIGRRVEQEEYAAGTTSLVKEKVNWSKNQLQHVQRTDKIAESRLVRDTYDTWPSAANVPKFDDQCAPATVQNYPASGSSQKQLPQDSSSMEYQPFSNPYVASCAYGNVANKHPAMHIIKPTDDEHQSMLSNSETFDVISGNKPGETPAAPVIMTPQEKIEKLRRRQQMRAILAIQKQQQQFGHQATNVDYTLSQKSCAEDNVLRMEKADLEADENLSILPCYDPSTPNKRDDSSTISDIDEYSAEDTVLYLLQDVISRLDLEIRLCVRDSLYRLAHSSMQRSYANDKSSTNRSGTYDIAKEETSSSDRFAGKVNMETETNHIDRIVAHLLFHRPFKLPVKHVETPESSTSTKLSLGQETASPSSLPVGFLSKSSKNEYNLSPRGLKTSQPFVDSGDEDILKDNPQRETRFNPQMKGKTESLQGLNILDNGADFNHD*

Click here to download the sequence:
Link to NCBI Protein BLAST