Transcript Information: R_Transcript_88609.p1


Annotated TAIR IDAT1G11950.1
Annotated Gene NameTranscription factor jumonji (jmjC) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4034747-4038310 | Reverse length=875
E-Value8.4E-292
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.30886772866
Replicate 23.9339473546877
Replicate 34.3417999365256
Condition 2: 8 Hour
Replicate 13.6008624922419
Replicate 23.1422154221274
Replicate 34.3500591900709
Condition 3: 24 Hour
Replicate 14.8516498934364
Replicate 24.0843072019588
Replicate 34.3393924324785


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88609.p1 GENE.R_Transcript_88609~~R_Transcript_88609.p1 ORF type:complete len:918 (+),score=145.54,JmjC|PF02373.18|5.6e+03,JmjC|PF02373.18|1.3e-13,zf-4CXXC_R1|PF10497.5|4.6e+03,zf-4CXXC_R1|PF10497.5|2.7e-07,zf-4CXXC_R1|PF10497.5|7.3e+03 R_Transcript_88609:144-2897(+)
ATGTGTGTGCAAATGATAACCCAGATATGCCCTCGGCCCCTCTTTCATTCTGTAAAGGGTTTCTCAGTGAATATGTCAGTCGTGGTTGCTAATGAGAGTCGGATGAACAATAAAAAGCGAAGATTGTTTAAAGCCTGCAATACTTCCAGGATCAAAGTGAATAGGAAGCTTCTGGAATCTGAAAGTGAACAAGACAGGGAAATCGGTAGTAGTGTTAACTCGAGGAAGAGGGGACGCCTTTGTAAATCTGTTGACCCAATCGACTATGGTGAACTGGAAGAGGAATACAGTGTTGAAGATACTTCAGAAGTAGAGGATGCTACAGAAGATGAAGATTATGAAGCTCCAAATAATAAACAGCAAGCTAGGAGTAAAACTAAGGGAAAAATTATTAATCGATCGCAGAGAAATACAAGAGTTATTAAAGAGAAGAACCATTCTTCTGAGAAGAAACTCAATGTGATAGAAAATGCAGTTCCACCAGTGCATAAGAAAATGAGAACTATTGGTAGACAGAAGCGTTGTGCATATAGTGATTGTGACTTGAAACAACCGGGTCTAAAGAGCAATAGTTCGGGAGAATCTGATTCTCATAAGTCATCCTCCTCTTTAACATCCTATTCTCCTGTCTCGGCAAACTCAAGTTCAACAGCAAATAGTTATGGTGACAGTGCAGCAAGATCAAGAAGAAATGCTGCTGTAAATAAGAAGGTAGAAGAGCAGGTGCAGGTGAAGTGTCATCAGTGTAGGAAAAATGACTGCAGATATGCTGTTAAATGCAAAGCATGCAAGGAGAAGCTATATTGTGTGCGATGTATCAAACAGTGGTATCCTCAACTACTCGAAGAGGAAATATCGGAAACCTGCCCCTTCTGTAGAAGGATTTGTAATTGTAACGAGTGTCTGCACTCAAGCGGTAGTATCAAGACATCAAATAAAGACATCTCTCACCATGAGAAAATTCAACATCTATGGTACCTGGTGAGATCATTGTTCCCATTTGTGCGGCAAATTAGTGAAGAGCAGTCTCAAGAAATAGAGCTTGAGGCACGGATACAAGGTGTTCCTCTGAATGAAGATGACGTGAAGGAGTCTTCTTGCTATGATGATGAGCGAATTTACTGCAATCAATGTGCAACTTCGATTTTCGATCTTCACAGAAGCTGCCCTAATTGCTGTTATGAACTTTGCTTGGCTTGTTCTCGAGAGATCCACCAAGGAAACCTCTTAGGAGGTCCAGAAGCAGTACCATTTAAGTACGCCGATAAGGGATATGTTTACATTCATGGGGGAGATCCTCTACCCGGCTGCTCTCCTCAGGAAAATACAGACGATATATTTGATTCAATGACTGAATGGAGAGCCAATATTGATGGGAGTATCCCTTGCCCCTTGGAAGAGCGGGGAGGTTGTGGTAAAGGAATTTTGGAGTTGAGGAGAATCCTTCCTAAGGGTTGGATACGGAGTCTAGGGAGAAAAGCGGAATCGCTCTTAAAAGATAAGGTTATTGAACAAGCACCTCCAAGTCCCTTTAAGAAGATTTCTCAAGCAGCTTTCCGAGAGAACTCCCATGACAATTACCTCTACTGCCCATCATCTGACGAGACACTCAGATCTGATGCGCTGATGCACTTCCGACAACATTGGTCCAACGGTGAACCTGTAATTGTTCGAGATGCTCTGCAGCAAGCAGCTGGATTGAGCTGGGAACCAATGGTAATGTGGCGAGCACTTTCTGACAATGTGGATTCTAATATTAAAGCCATTGATTGCCTGGCTAACTGCGAGGTGGAAATCAGTCCTCGCCATTTCTTCAAGGGATATACAGAAGGTCGAAGATATGCTAATTTCTGGCCTGAGATGTTGAAGCTAAAAGATTGGCCTCCCTCAGATAAGTTTGACGATCTCTTACCTAGACACTGTGATGAGTTTATCAGCGCATTGCCATTCCAAGAGTACACAGATCCTCGGGGGGGAATCCTTAACCTTGGTGCAATGTTACCACCAACTATCTTGAAACCAGATTTGGGGCCGAAGACATATATAGCTTATGGTATACCCCAAGAGCTTGGAAGAGGAGATTCTGTCACTAAGCTTCATTGTGACATGTCGGATGCTTTAAATATTTTGATGCATACGGCTGATGTTACCTTAAGTGAAGATCAGGATTCGGCAATCGCTATGCTCAAAAAGCAACACAGAGCTCAAGATCAAAGGGAGTTGAATTTCATGCAAGAGGACATCAAACATGGCTCTTCTACTTCAACAGAAACAGGCGCTGCTCTTTGGGACATTTTCAGGAGGGAAGACGTACCAAAACTAGAAGCGTATCTAAGAAGACATGCAAAGGAGTTCAGGCATACTTACGGTTCTCCAGTTGAACAGGTCATCCACCCCATCCATGATCAGTCCTTCTATTTAACTGCAGAGCACAAGCGAAAACTCAAAGAGGAATATGGGGTTGAACCATGGACATTTGAGCAAAGGCTCGGAGAGGCAGTATTTATACCTGCTGGCTGTCCCCATCAAGTCCGAAATCTCAAGTCATGCACAAAGGTAGCTGTAGATTTCGTCTCCCCTGAAAACGTCCAAGAGTGCCTACGGCTGACAGAGGAGTACCGGAAACTTCCAAAGTTCCACAGGGCGCGAGAAGACAAACTCGAGATCAAGAAGATGATTCTCCATGCAGTCAATCAAGCAGTCAAAGAACTAGAGGAAACTGAGTTGATCACTTCAAGGCAGGAACAAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88609.p1 GENE.R_Transcript_88609~~R_Transcript_88609.p1 ORF type:complete len:918 (+),score=145.54,JmjC|PF02373.18|5.6e+03,JmjC|PF02373.18|1.3e-13,zf-4CXXC_R1|PF10497.5|4.6e+03,zf-4CXXC_R1|PF10497.5|2.7e-07,zf-4CXXC_R1|PF10497.5|7.3e+03 R_Transcript_88609:144-2897(+)
MCVQMITQICPRPLFHSVKGFSVNMSVVVANESRMNNKKRRLFKACNTSRIKVNRKLLESESEQDREIGSSVNSRKRGRLCKSVDPIDYGELEEEYSVEDTSEVEDATEDEDYEAPNNKQQARSKTKGKIINRSQRNTRVIKEKNHSSEKKLNVIENAVPPVHKKMRTIGRQKRCAYSDCDLKQPGLKSNSSGESDSHKSSSSLTSYSPVSANSSSTANSYGDSAARSRRNAAVNKKVEEQVQVKCHQCRKNDCRYAVKCKACKEKLYCVRCIKQWYPQLLEEEISETCPFCRRICNCNECLHSSGSIKTSNKDISHHEKIQHLWYLVRSLFPFVRQISEEQSQEIELEARIQGVPLNEDDVKESSCYDDERIYCNQCATSIFDLHRSCPNCCYELCLACSREIHQGNLLGGPEAVPFKYADKGYVYIHGGDPLPGCSPQENTDDIFDSMTEWRANIDGSIPCPLEERGGCGKGILELRRILPKGWIRSLGRKAESLLKDKVIEQAPPSPFKKISQAAFRENSHDNYLYCPSSDETLRSDALMHFRQHWSNGEPVIVRDALQQAAGLSWEPMVMWRALSDNVDSNIKAIDCLANCEVEISPRHFFKGYTEGRRYANFWPEMLKLKDWPPSDKFDDLLPRHCDEFISALPFQEYTDPRGGILNLGAMLPPTILKPDLGPKTYIAYGIPQELGRGDSVTKLHCDMSDALNILMHTADVTLSEDQDSAIAMLKKQHRAQDQRELNFMQEDIKHGSSTSTETGAALWDIFRREDVPKLEAYLRRHAKEFRHTYGSPVEQVIHPIHDQSFYLTAEHKRKLKEEYGVEPWTFEQRLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVQECLRLTEEYRKLPKFHRAREDKLEIKKMILHAVNQAVKELEETELITSRQEQR*

Click here to download the sequence:
Link to NCBI Protein BLAST