Transcript Information: R_Transcript_88615.p1


Annotated TAIR IDAT5G01630.1
Annotated Gene NameBRCA2-like B
Annotated Gene Symbol(s)BRCA2B, BRCA2(V), ATBRCA2(V)
Annotation TypeOrtholog
Chromosome Positionchr5:235117-240911 | Reverse length=1155
E-Value4.8e-317
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3468092656067
Replicate 20.89984144641277
Replicate 31.390766211195
Condition 2: 8 Hour
Replicate 11.1368437296935
Replicate 21.3775900420016
Replicate 32.8361891594355
Condition 3: 24 Hour
Replicate 12.6237493974519
Replicate 22.1858336936197
Replicate 32.8336760532144


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88615.p1 GENE.R_Transcript_88615~~R_Transcript_88615.p1 ORF type:complete len:1120 (+),score=230.80,BRCA-2_OB1|PF09103.6|3.5e-35,BRCA2|PF00634.14|2.2,BRCA2|PF00634.14|1.9e-08,BRCA2|PF00634.14|1.5e-09,BRCA-2_helical|PF09169.6|7e-19 R_Transcript_88615:231-3590(+)
ATGTCGACGTGGCAGCTATTCTCCGACTCCGGCAACAATTTCCGGTGGGAACGTTCTAGCCAGCAGCTTCCAACTCGTAAACCCTACCATCAAAACCATTCCGATTCTCCTCCTTCTCGCTTCCCTTCTTTCGAGAATGTATTATCTCAATGGCAATCAATGATTCTGGTCGAGGATTGCGAAACACCAGATGCTGATAAGATTCCTGTGTTTCGAACTGGATTGGGGAACTCCGTTGTGTTGAAATCATCTTCAATTGCTAAAGCTTCTTCTGTTCTTGGCGTTGATTATGGCCTCATTGACACTGGTCAGTCATGTATCACACAAAGTGGTTTCACTTCTCCTAATTCTATGTTCCAAACGGGGAGTGGGAAGAAGGTCAGTGTTTCTTCTGCAGGACTTCTCAGAGCCAAAGCATTGTTGGGACTGAATGAAAGTAATGATGAGTTCGATATTCAAGGCTTCAAACCTGCAATTAAGAAATTTAGTGGCAATGATAGTTATGCACCTGAGAAACGGTTCAAGGAGGTGGTGTTGAATGGTGTGGGAAATGAGACTAGTTCAGTGCTCACTAAGGTTCCACCTCTTTTTAAGACTAATTTGACAGGAAATGAATTTGTTGGCGAGAACATTGGCAAAATTTTAGAACCAAAAAGTTGTAGCTCCTCTAGTAAACCGCCTCCGATTAAGTTCCATACTGCTGGTGGCAGATCAATTTCAGTATCTAGTGATGCATTGCAGCGTGCGAGAAGCCTTCTTGGTGATCCAGAGATGGGCAACTTTTTAGATGAGGGTGATGCAGGTGCTTCCATGTCTTCATTTTTTAATAAGGATACTTTGGATGTAAAGTCCTTCAATTCAGATGGGAATTTTTTCAAAAGTGTGAAACATACTAATTCTTCTCTGACACATCATCAACAAGAAATGAGTGAACAAAATCCCAAGGTATTTGTATCACCAATGCGCTCATCTGTTAACAGAGAACACTCAGAAGCCAAATCAGACATTATGCTTTCAGGGACCAATTTGCTCTCGAAATTTGATGCAGAGGAAAGGATCTCTAAAACAACCACTGATACATCCTGTCTGAAAAAGCCTTTCCACGAGCCTGATACATTAACACAGTTCTCTGGTTTAAATGGTTTGTGTTCGAGCATCCATAGACCAAAAAGGTCACTAGGGGGCCCACTTGCTGATATTACAAACATCACAGGCATTGATTTAGCAAGCAAAAAAGGAGCAACTACTGAGCTAAGGAGACTTGGGAAAAGGAGTTCTGTTTCTCCATTCAAAAGGCCACGGAACGCAAAATTCATTACCCCTTTAAACTCCAACCTTTCATGTGCTCCTGATGGATTCGTCAACAGGGTATCTGAAGCTTCACATTCCAGAAAAAGGGTGTCTACTCATTACCCATTTCAAAATTTAAGACCATATACCAAAGACTTCTTCAAAGTGCCTCCAAAACACCCAAAAGAGCTGAAGCATCTTCCAGAGCAAGTACAATTGATAAGTCCTGTCAACTCAGAGAAGTACATGTTTTCTGATGGATCCCAGTTTGTTGGTGTTGAAGCTTTCCACAATATGCTGGCTCAATCTGGGGCTTCCATGCAACATGCAACAAAACAATGGGTAGCAAATCACTACAAGTGGATTGTGTGGAAACTTGCTAGTTATGAGAGATGCTATTCGGCTAAATTTACGAAGAAATTTCTCACTATTTCTAATGTGCTAGATGAACTGAAGTACAGATATGAACGTGAAATTAATCATGGTCAACGTTCTTCAATTAAGAAAATTTTGGAAGGAGATGCAGCACCATCTTCCATGCTGGTTCTATGTGTTTCAGCTATTCGTTCTGCTTCTAAGATTGGAACTCCCAGTACAAGTGGAGTTGAGATGAGTAGCAGTGCCAGTGCCAGACTAGAACTTACTGATGGGTGGTACTCTATAGATGCACAGTTGGATGTGATTCTCTCAAAGCACCTTGCTGCTGGAAAAGTATTCGTGGGGCAAAAACTACAGATCTGTGGAGCGGGTTTAAATGGCTGGGATGGTCCTGTGTCTCCTCTTGAGGGTTCACCGTCAATTAGTTTATTGTTGCACATAAATGGAACTTATAGAGCAGGCTGGGCAGAGCGTTTAGGATTCTGTAAAGGTGCATGCCCTCCGTTGGCATTTCGGTGTGTTAAGAGTAATGGGGGTCCAATTCCTAGGACCCTAGTTGGAATTACGAGGATATATCCTGTCCTTTATAGAGAAAGGTTGAGGAGTGGGGATTATATTGTGAGGTCAGAGAAGACAGAGGCTGCATTTTCACAGCTTTATAACCAGAGACGCTCTGACATCATAGAGGGAGTTGCATCTGACTTTCAGAGAGGCAGTAGTAGTTCCTGTAACCCAAATGACTATGATAATGAAGAGGGAGCAAGGATTCTGAAGATGCTTGAGAGTGCTGCTGAACCAGAATTGTTGATGGCAGAAATGAGTTCTGAGCAGCTATCATCCTTTTCCATGTATCGAGCAAAAGTAGAGGCAAGCAGACAGTTTGACTTGCAGAGATTGATCGAGAAAGAACTTGAAGAAGCAGGGTTGAGTGCCAGAGAAGTCACCCCATTTATGCGAGTTAGGGTTGTTGGGCTAAAAAGTGATGGCCCAGCTGAAGCTAAAGACCCTAGGGAAGGCTTAATTACAATATGGAATCCTACAGAGAGGCAGCAACTTGAGCTGTCAGAAGGTCAGGCGTATGCTATTTCAGGCCTCATACCACTGCATTCAGATCTCAATCTGCTTTATCTACAAGCTAGAGGATCTAACTCTAAATGGCAGCCTTTAAGTACTAAAGAGCAGGAATCTTTTGTGCCATTCTTCAAACCTCGCAAACCAGTATCATTATCAAGAATAGGGGAAATTCCTCTATCCAGTGAATTTGATACCGCTGTGTTGATTTTACACGTTGGGCTGGAATATATAGTTGGCCAGCAAAAGAAACAGTGGGTGTTTGTCGCTGATGGATCCTTATGCAAGTTACAACCAGAAGAATCAACAAAGTCCTTGCTAGCAATTAGTTTCTCTTCGCTACGCACTGAGGATGATTCAATATCTCCCATCAACCATAACCTCATCGGCTCCATAGTTGGCTTCTGCAATCTAGTGAAGAGAACCAAGGATCACATGAATAATATGTGGGTTGCAGAAGCAACTGAAAACACTACATATTACCTTAACAATGATTATCATGGTTGTTCCCATCTCAAAGATGCTTTTGCCTTTGTGAAGAAATGGCAGCAAAGTTCCAACTTGATAATTGAGAAGCTCAAGGAGAAGGTGCTGCATATAGTTGGTGGTTGTAAAGGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88615.p1 GENE.R_Transcript_88615~~R_Transcript_88615.p1 ORF type:complete len:1120 (+),score=230.80,BRCA-2_OB1|PF09103.6|3.5e-35,BRCA2|PF00634.14|2.2,BRCA2|PF00634.14|1.9e-08,BRCA2|PF00634.14|1.5e-09,BRCA-2_helical|PF09169.6|7e-19 R_Transcript_88615:231-3590(+)
MSTWQLFSDSGNNFRWERSSQQLPTRKPYHQNHSDSPPSRFPSFENVLSQWQSMILVEDCETPDADKIPVFRTGLGNSVVLKSSSIAKASSVLGVDYGLIDTGQSCITQSGFTSPNSMFQTGSGKKVSVSSAGLLRAKALLGLNESNDEFDIQGFKPAIKKFSGNDSYAPEKRFKEVVLNGVGNETSSVLTKVPPLFKTNLTGNEFVGENIGKILEPKSCSSSSKPPPIKFHTAGGRSISVSSDALQRARSLLGDPEMGNFLDEGDAGASMSSFFNKDTLDVKSFNSDGNFFKSVKHTNSSLTHHQQEMSEQNPKVFVSPMRSSVNREHSEAKSDIMLSGTNLLSKFDAEERISKTTTDTSCLKKPFHEPDTLTQFSGLNGLCSSIHRPKRSLGGPLADITNITGIDLASKKGATTELRRLGKRSSVSPFKRPRNAKFITPLNSNLSCAPDGFVNRVSEASHSRKRVSTHYPFQNLRPYTKDFFKVPPKHPKELKHLPEQVQLISPVNSEKYMFSDGSQFVGVEAFHNMLAQSGASMQHATKQWVANHYKWIVWKLASYERCYSAKFTKKFLTISNVLDELKYRYEREINHGQRSSIKKILEGDAAPSSMLVLCVSAIRSASKIGTPSTSGVEMSSSASARLELTDGWYSIDAQLDVILSKHLAAGKVFVGQKLQICGAGLNGWDGPVSPLEGSPSISLLLHINGTYRAGWAERLGFCKGACPPLAFRCVKSNGGPIPRTLVGITRIYPVLYRERLRSGDYIVRSEKTEAAFSQLYNQRRSDIIEGVASDFQRGSSSSCNPNDYDNEEGARILKMLESAAEPELLMAEMSSEQLSSFSMYRAKVEASRQFDLQRLIEKELEEAGLSAREVTPFMRVRVVGLKSDGPAEAKDPREGLITIWNPTERQQLELSEGQAYAISGLIPLHSDLNLLYLQARGSNSKWQPLSTKEQESFVPFFKPRKPVSLSRIGEIPLSSEFDTAVLILHVGLEYIVGQQKKQWVFVADGSLCKLQPEESTKSLLAISFSSLRTEDDSISPINHNLIGSIVGFCNLVKRTKDHMNNMWVAEATENTTYYLNNDYHGCSHLKDAFAFVKKWQQSSNLIIEKLKEKVLHIVGGCKG*

Click here to download the sequence:
Link to NCBI Protein BLAST