Transcript Information: R_Transcript_88666.p1


Annotated TAIR IDAT5G48560.1
Annotated Gene Namebasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19684160-19686871 | Forward length=498
E-Value1E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.7028897706663
Replicate 25.3043285262227
Replicate 37.2337066093113
Condition 2: 8 Hour
Replicate 16.8302675905473
Replicate 29.1797304400657
Replicate 37.8338530045881
Condition 3: 24 Hour
Replicate 17.9748172475183
Replicate 26.5004973572228
Replicate 38.9854787662


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88666.p1 GENE.R_Transcript_88666~~R_Transcript_88666.p1 ORF type:3prime_partial len:190 (+),score=50.97 R_Transcript_88666:252-818(+)
ATGGAAAAGCAGCTCAATTGCCCATCATTAATGGCACCAATGGAAATCAACACACCAGACAATCTTCAACCCAGTTATTTTAGCTCAAATTGGGACACCCCAGTTGATCAAAATGACCCCTTTGAATCAGCACTTAGCTCAATGGTTTCATCTCCTACATCCAATGTTGTTGTTGGTGATGGTATGATGATCAGAGAATTGATTGGAAGGCTTGGAAGTATTTGTGATTCTGGTGAAATCTCACCTCAATCTTGCATTGCTAATAGTACCAATACTTCTTGTTATAGTACCCCATTGAATTCCCCTCCAAAAATCAATCTTTCCCAGATTAATAATATGTTCTTAGGAGGTGGAGGGCATCATGGTAATTTCCCAACTCACCCTCCTAGTTTAGGTTCTTTCAATCCAGATCCTGGGTTTGTTGAGAGAGCTGCCAAATTTTCATGCTTTGGAAATAATAATCATAATAAAAATAATAATGGTGGTGGTGGTGGTAATAATAATGGTGATTCAAGGGAAGGATCTTCAGTTTCTGAGCAAAACCCAGGTGGTGAAATGGTAATTTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88666.p1 GENE.R_Transcript_88666~~R_Transcript_88666.p1 ORF type:3prime_partial len:190 (+),score=50.97 R_Transcript_88666:252-818(+)
MEKQLNCPSLMAPMEINTPDNLQPSYFSSNWDTPVDQNDPFESALSSMVSSPTSNVVVGDGMMIRELIGRLGSICDSGEISPQSCIANSTNTSCYSTPLNSPPKINLSQINNMFLGGGGHHGNFPTHPPSLGSFNPDPGFVERAAKFSCFGNNNHNKNNNGGGGGNNNGDSREGSSVSEQNPGGEMVIS

Click here to download the sequence:
Link to NCBI Protein BLAST