Transcript Information: R_Transcript_88680.p1


Annotated TAIR IDAT5G50310.1
Annotated Gene NameGalactose oxidase/kelch repeat superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20474562-20479281 | Forward length=666
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.104560737737
Replicate 210.744441122123
Replicate 313.199923570803
Condition 2: 8 Hour
Replicate 114.181695973844
Replicate 215.672289618895
Replicate 320.493753926243
Condition 3: 24 Hour
Replicate 116.696587074694
Replicate 215.587441034103
Replicate 316.399731810857


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88680.p1 GENE.R_Transcript_88680~~R_Transcript_88680.p1 ORF type:complete len:682 (+),score=180.12,Kelch_5|PF13854.2|0.01,Kelch_5|PF13854.2|1e-08,Kelch_5|PF13854.2|4.8e-06,Kelch_5|PF13854.2|0.00026,Kelch_5|PF13854.2|0.017,Kelch_5|PF13854.2|3.9e-05,Kelch_3|PF13415.2|1.8e+03,Kelch_3|PF13415.2|2.6e-07,Kelch_3|PF13415.2|2.7e-09,Kelch_3|PF13415.2|3.5e-06,Kelch_3|PF13415.2|0.00046,Kelch_3|PF13415.2|1.2e+02,Kelch_3|PF13415.2|5.8,Kelch_4|PF13418.2|6.7e-07,Kelch_4|PF13418.2|1.7e-08,Kelch_4|PF13418.2|0.00028,Kelch_4|PF13418.2|0.74,Kelch_4|PF13418.2|9.3,Kelch_4|PF13418.2|0.0027,Kelch_6|PF13964.2|1.2,Kelch_6|PF13964.2|1.2e-08,Kelch_6|PF13964.2|2.2e-05,Kelch_6|PF13964.2|0.00017,Kelch_6|PF13964.2|1.7,Kelch_6|PF13964.2|24,DUF4110|PF13422.2|3.3e+03,DUF4110|PF13422.2|7.5e+03,DUF4110|PF13422.2|4.7e-30,Kelch_1|PF01344.21|3.9,Kelch_1|PF01344.21|8.5e-05,Kelch_1|PF01344.21|2.3e-05,Kelch_1|PF01344.21|0.0014,Kelch_1|PF01344.21|21,Kelch_1|PF01344.21|15,Kelch_2|PF07646.11|2.3,Kelch_2|PF07646.11|0.00059,Kelch_2|PF07646.11|3.2e-05,Kelch_2|PF07646.11|2.9e-05,Kelch_2|PF07646.11|3,Kelch_2|PF07646.11|2e+03 R_Transcript_88680:312-2357(+)
ATGGGGAAGAAACAGAAGAAACCAGGAAAAGGGAAGGAGAAAACAGAGAGAAAAACAGCCAAAGCTGAAGAGAAAAAAGCTCGTCGTGAATCCAAGAAACTCTCTCCTGAAGATGATATTGACGCCATTTTGTTGAGTATACAAAAAGAGGAAGCTAAAAAGAAGGAAGTTCATGTTGATGATAATGTGCCAGCCCCATCTCCCCGGTCCAATTGCTCGTTAAATGTAAACCCACAGAAAGAGACTGAATTGATCCTTTACGGAGGTGAATTCTACAATGGCAGCAAGACTTTTGTCTATGGCGATCTTTATCGGTATGACGTTGACAAACAAGAGTGGAAGTTGGTATCCAGTCCCAATAGCCCACCACCACGCAGTGCTCATCAGGCAGTTGCCTGGAAGAATTACATCTATATATTTGGAGGTGAGTTCACATCACCAAATCAGGAGAGGTTCCATCACTACAAGGACTTTTGGATGTTAGATCTAAAAACAAATCAATGGGAGCAGCTAAATTACAAAGGTGCTCCAAGTCCACGCTCTGGTCATCGGATGATACTGTACAAGCACAAGATAATAGTCTTTGGCGGTTTTTATGACACTCTTCGAGAAGTAAGGTACCTCAATGATTTGCATGTATTTGACCTTGATCAATTCAAGTGGCAAGAAATAAAACCTCGGCCTGGATGCATGTGGCCTAGTCCAAGGAGCGGTTTCCAGTTAGCCGTTTATCAAGATGAGATATTTTTATATGGAGGCTATTTTAAAGAAGTTGCTTCAGATAAAATAAACTCCAGCTCTGAGAAGGGAATCGTTCATGCAGACATGTGGTCCCTGGACCCAAGAACTTGGGAATGGAACAAGGTAAAGAAAAGTGGGATGCCTCCCGGACCTCGTGCTGGATTTTCCATGTGTGTGCACAAAAAACGAGCTGTACTATTTGGAGGAGTGGTCGATATGGAGGTTGAAGGTGATGTAATGATGAGTCTGTTTCTGAATGAGCTTTATGGTTTCCAAATGGACAATCATCGCTGGTACCCGTTGGAGCTACGGAAGGAGAAATCCAGTAAAGATAAGTTAAAAAAGATCCAGAAGAATAACATTGTCTCACTTGAAAATAAGCATAGTTCATCAGAGATGGACACTACTGATTCTAATGATGCTGATACACCTATGGCTGACCAAGAAGGAGCTGAGTTGGAGGACAGCATTGCTGAGATATCTCTGCAGACAGAAAATTATCAAAATAATGGTGGGCTGGGGTCGAAAAATGGTGGCAAATCACTTGAACCTGGAAGCAGTGGGGAATCTCAAAATAATTCTTTACCAGAGATAGTGAAGCCTTGTGGACGTATCAATGCTTGCTTGGCTGTTGCAAGAGATACATTATACTTGTATGGGGGCATGATGGAAGTCAAAGATCGTGAGATTACTCTTGATGATCTCTACTTGCTAAATCTAAGCAAACTGGATGAATGGAAGTGCATAATACCAGCTTCTGAATGTGAATGGGTTGAATCTTCTGAGGACGAAGATGAAGAGGAGGAAGATGAGAATGATAGTGAAGCCAGTGGTGAAAGTGGCAATGATGAGACAGATGATGATGATGATGATGGTGGTGGTGATGAGATGGAGAGCGGTGATGGAAAACCTCTTCAAGTGGGAGATGCTGTTGCTTTAATAAAGGGACAAGGAAAGAATCTTCGGAGGAAGGAAAAACGAGCAAGAATAGAGCAAATTAGAGCTAGTCTTGGCCTTTCCGACGCAATGAGGACTCCTTTGCCTGGGGAAACCTTGAGGGACTTCTACAGACGTACCAATATGTACTGGCAAATGGCAGCACATGAGCATACTCAGCATACCGGCAAGGAGCTCCGGAAAGATGGTTTCGATCTTGCTGAAGCTCGATATAAGGAGCTCAAACCGCTTTTGGATGAGCTCGCCATATTAGAGGAGGAGCAGAAGGCAGAAGAGCAAGAAGTCGCGGAATCAAGCTCCAGGAAGGGAGGCAACAAGAAGAACAGGCGTTCATCAACGCAAAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88680.p1 GENE.R_Transcript_88680~~R_Transcript_88680.p1 ORF type:complete len:682 (+),score=180.12,Kelch_5|PF13854.2|0.01,Kelch_5|PF13854.2|1e-08,Kelch_5|PF13854.2|4.8e-06,Kelch_5|PF13854.2|0.00026,Kelch_5|PF13854.2|0.017,Kelch_5|PF13854.2|3.9e-05,Kelch_3|PF13415.2|1.8e+03,Kelch_3|PF13415.2|2.6e-07,Kelch_3|PF13415.2|2.7e-09,Kelch_3|PF13415.2|3.5e-06,Kelch_3|PF13415.2|0.00046,Kelch_3|PF13415.2|1.2e+02,Kelch_3|PF13415.2|5.8,Kelch_4|PF13418.2|6.7e-07,Kelch_4|PF13418.2|1.7e-08,Kelch_4|PF13418.2|0.00028,Kelch_4|PF13418.2|0.74,Kelch_4|PF13418.2|9.3,Kelch_4|PF13418.2|0.0027,Kelch_6|PF13964.2|1.2,Kelch_6|PF13964.2|1.2e-08,Kelch_6|PF13964.2|2.2e-05,Kelch_6|PF13964.2|0.00017,Kelch_6|PF13964.2|1.7,Kelch_6|PF13964.2|24,DUF4110|PF13422.2|3.3e+03,DUF4110|PF13422.2|7.5e+03,DUF4110|PF13422.2|4.7e-30,Kelch_1|PF01344.21|3.9,Kelch_1|PF01344.21|8.5e-05,Kelch_1|PF01344.21|2.3e-05,Kelch_1|PF01344.21|0.0014,Kelch_1|PF01344.21|21,Kelch_1|PF01344.21|15,Kelch_2|PF07646.11|2.3,Kelch_2|PF07646.11|0.00059,Kelch_2|PF07646.11|3.2e-05,Kelch_2|PF07646.11|2.9e-05,Kelch_2|PF07646.11|3,Kelch_2|PF07646.11|2e+03 R_Transcript_88680:312-2357(+)
MGKKQKKPGKGKEKTERKTAKAEEKKARRESKKLSPEDDIDAILLSIQKEEAKKKEVHVDDNVPAPSPRSNCSLNVNPQKETELILYGGEFYNGSKTFVYGDLYRYDVDKQEWKLVSSPNSPPPRSAHQAVAWKNYIYIFGGEFTSPNQERFHHYKDFWMLDLKTNQWEQLNYKGAPSPRSGHRMILYKHKIIVFGGFYDTLREVRYLNDLHVFDLDQFKWQEIKPRPGCMWPSPRSGFQLAVYQDEIFLYGGYFKEVASDKINSSSEKGIVHADMWSLDPRTWEWNKVKKSGMPPGPRAGFSMCVHKKRAVLFGGVVDMEVEGDVMMSLFLNELYGFQMDNHRWYPLELRKEKSSKDKLKKIQKNNIVSLENKHSSSEMDTTDSNDADTPMADQEGAELEDSIAEISLQTENYQNNGGLGSKNGGKSLEPGSSGESQNNSLPEIVKPCGRINACLAVARDTLYLYGGMMEVKDREITLDDLYLLNLSKLDEWKCIIPASECEWVESSEDEDEEEEDENDSEASGESGNDETDDDDDDGGGDEMESGDGKPLQVGDAVALIKGQGKNLRRKEKRARIEQIRASLGLSDAMRTPLPGETLRDFYRRTNMYWQMAAHEHTQHTGKELRKDGFDLAEARYKELKPLLDELAILEEEQKAEEQEVAESSSRKGGNKKNRRSSTQR*

Click here to download the sequence:
Link to NCBI Protein BLAST