Transcript Information: R_Transcript_88683.p1


Annotated TAIR IDAT5G50310.1
Annotated Gene NameGalactose oxidase/kelch repeat superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20474562-20479281 | Forward length=666
E-Value1.5E-116
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.51562036595251
Replicate 20.35586949858132
Replicate 30.64708298294216
Condition 2: 8 Hour
Replicate 10.96836754028653
Replicate 20.75799599461646
Replicate 30.61530883458939
Condition 3: 24 Hour
Replicate 11.1673461302222
Replicate 20.6230299121632
Replicate 30.37097804554063


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88683.p1 GENE.R_Transcript_88683~~R_Transcript_88683.p1 ORF type:complete len:177 (+),score=24.69,Kelch_3|PF13415.2|3.6e+02,Kelch_3|PF13415.2|3.3e-08,Kelch_3|PF13415.2|3.3e-10,Kelch_3|PF13415.2|3.4e+02,Kelch_4|PF13418.2|8.1e-08,Kelch_4|PF13418.2|2e-09,Kelch_4|PF13418.2|18,Kelch_5|PF13854.2|0.0014,Kelch_5|PF13854.2|1.4e-09,Kelch_5|PF13854.2|0.0019,Kelch_6|PF13964.2|0.16,Kelch_6|PF13964.2|9.6e-10,Kelch_6|PF13964.2|0.18,Kelch_1|PF01344.21|0.65,Kelch_1|PF01344.21|1.2e-05,Kelch_1|PF01344.21|0.23,Kelch_2|PF07646.11|0.33,Kelch_2|PF07646.11|8.4e-05,Kelch_2|PF07646.11|0.038 R_Transcript_88683:300-830(+)
ATGAGGAAAATATGTGATTTTGTTGTGCAGTTGAGTATACAAAAAGAGGAAGCTAAAAAGAAGGAAGTTCATGTTGATGATAATGTGCCAGCCCCATCTCCCCGGTCCAATTGCTCGTTAAATGTAAACCCACAGAAAGAGACTGAATTGATCCTTTACGGAGGTGAATTCTACAATGGCAGCAAGACTTTTGTCTATGGCGATCTTTATCGGTATGACGTTGACAAACAAGAGTGGAAGTTGGTATCCAGTCCCAATAGCCCACCACCACGCAGTGCTCATCAGGCAGTTGCCTGGAAGAATTACATCTATATATTTGGAGGTGAGTTCACATCACCAAATCAGGAGAGGTTCCATCACTACAAGGACTTTTGGATGTTAGATCTAAAAACAAATCAATGGGAGCAGCTAAATTACAAAGGTGCTCCAAGTCCACGCTCTGGTCATCGGATGATACTGTACAAGCACAAGATAATAGTCTTTGGCGGTTTTTATGACACTCTTCGAGAAGTAAGGTTGTTTTCTTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88683.p1 GENE.R_Transcript_88683~~R_Transcript_88683.p1 ORF type:complete len:177 (+),score=24.69,Kelch_3|PF13415.2|3.6e+02,Kelch_3|PF13415.2|3.3e-08,Kelch_3|PF13415.2|3.3e-10,Kelch_3|PF13415.2|3.4e+02,Kelch_4|PF13418.2|8.1e-08,Kelch_4|PF13418.2|2e-09,Kelch_4|PF13418.2|18,Kelch_5|PF13854.2|0.0014,Kelch_5|PF13854.2|1.4e-09,Kelch_5|PF13854.2|0.0019,Kelch_6|PF13964.2|0.16,Kelch_6|PF13964.2|9.6e-10,Kelch_6|PF13964.2|0.18,Kelch_1|PF01344.21|0.65,Kelch_1|PF01344.21|1.2e-05,Kelch_1|PF01344.21|0.23,Kelch_2|PF07646.11|0.33,Kelch_2|PF07646.11|8.4e-05,Kelch_2|PF07646.11|0.038 R_Transcript_88683:300-830(+)
MRKICDFVVQLSIQKEEAKKKEVHVDDNVPAPSPRSNCSLNVNPQKETELILYGGEFYNGSKTFVYGDLYRYDVDKQEWKLVSSPNSPPPRSAHQAVAWKNYIYIFGGEFTSPNQERFHHYKDFWMLDLKTNQWEQLNYKGAPSPRSGHRMILYKHKIIVFGGFYDTLREVRLFSC*

Click here to download the sequence:
Link to NCBI Protein BLAST