Transcript Information: R_Transcript_88733.p1


Annotated TAIR IDAT3G57660.1
Annotated Gene Namenuclear RNA polymerase A1
Annotated Gene Symbol(s)NRPA1
Annotation TypeHomolog
Chromosome Positionchr3:21353746-21362814 | Forward length=1670
E-Value5E-146
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.8856147129992
Replicate 28.3441859325399
Replicate 38.1295630655476
Condition 2: 8 Hour
Replicate 18.0563474318108
Replicate 29.0931497320903
Replicate 310.367555788724
Condition 3: 24 Hour
Replicate 110.184609491033
Replicate 29.3765425967334
Replicate 39.18393523831


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88733.p1 GENE.R_Transcript_88733~~R_Transcript_88733.p1 ORF type:internal len:541 (+),score=126.55,RNA_pol_Rpb1_5|PF04998.13|7.8e-66,RNA_pol_Rpb1_4|PF05000.13|2.5e-20,RNA_pol_Rpb1_4|PF05000.13|1.6e+04 R_Transcript_88733:2-1621(+)
TTTATTGGGCGTGAGAAAGACCTTGTAGGCTCTGCTGAGATGCAGATTGAAATAGAAAAAGCAATACGCCGCAATGGAGATTCTGCAATAGCACTTTTGGATGGGATGATGCGGAGCAAACTCAATTCACTGAACTCAGCCGTCACTAAGCTTTTCCCAGAAGGGCTAAGTAAACCATTCCGGAGGAACTGCCTTTCACTTATGACACTCTCTGGAGCGAAAGGTGGCACATTCAACTTCCAGCAAATCTCTCTCCTTCTGGGTCAGCAAGAGTTGGAAGGGAAGCGAGTGCCTCGGATGGTCTCCGGAAAAACATTGCCATGCTTCCCTGCTTGGGACAGTTCAGCTCGAGCTGGAGGATTCATCAGTGATCGTTATCTTTCTGGGCTTCGCCCTCAGGAATTCTATTTCCATTGCATGGCTGGTCGTGAAGGATTAGTCGATACCGCTGTCAAAACATCTCGCAGTGGATATTTGCAAAGATGCTTGATAAAAAACCTGGAGTGTCTCAAAGTTCATTATGATTATACGGTTCGTGATGCGGATGGATCCATTGTCCAGTTCCGCTATGGGGAAGATGGCGTTGATGTCCATCAGAAAAACTATTTGCAAGAATTTGAAGCACTAGCAGTGAATCAACAGCTGATCATGAGCAGAAATCCTCTTAGTCAACTGCACGATGCATGCCTATCTGAATACATTGAAGAAGACAATGATTTGCCGAATGAATATGCCAAAAAAGCTCAGAACTTCTTAAAAAATGATATGAAAGTTAACATTTGTGGATTTACACACCGAAAGGACCGTTTAAACTTTGTGAAGCTGGTGAAGAACAAATACTTCATGAGTCTGGCACAGCCTGGAGAACCTGTCGGTGTTATTGCTGGGCAGTCTGTTGGAGAGCCGTCCACTCAAATGACATTAAATACATTTCATCATGCTGGTCGTGGAGAAATGAATGTGACGCTGGGAATTCCGCGTCTGCAGGAGATTTTAATGACTGCATCAGTTTCTATCAAGACTCCAACTATGACATGCCCTTTGCTGAAGTGCAAGTCAAAGGATGATGCGGAACGCCTTGCTGCAAGGTTGAACAGGATCACGGTTGCTGACTTAATAGAGAAGATGGAAGTTAGTATTGTGCCATTTACTATTAATGAACATGAGATCTGCAGTGTTTACAAGCTTAAAATAAAGCTGTATGCACCGGAGCTTTATCCTCCTCATACTGAAATAACATTACAAAACTGCTATGAAACCCTGGAAGATAAATTTTTGCGGGAACTAGAAGACACGATACAGACTCATATGAGTTTGCTTTCAAGAATTAGCGGTATCTCTTCTGTATCCTTGTCAAATACAACAGATGAGGCTGAGGAGGATGGATCTGGTAAGAAGTCACCGACAGGTGAAGATGATGACGGTGATGATGAAGACGGTGACAATGAAGCTGCAGAAGATTTAGGTTCAGAAGCTTCAAGAAGCAAAAAAGCTATAGATGAGATGGATTATGAGGAGAACACTGAAGAGGCAGAAGAAGAAGAAGAAAAAGAAGAAGATGATGAAGAAGAAGAAAATGAAGAAGAGAGGCGTGCAGCTGAAACTGAAGGTTCAGTGGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88733.p1 GENE.R_Transcript_88733~~R_Transcript_88733.p1 ORF type:internal len:541 (+),score=126.55,RNA_pol_Rpb1_5|PF04998.13|7.8e-66,RNA_pol_Rpb1_4|PF05000.13|2.5e-20,RNA_pol_Rpb1_4|PF05000.13|1.6e+04 R_Transcript_88733:2-1621(+)
FIGREKDLVGSAEMQIEIEKAIRRNGDSAIALLDGMMRSKLNSLNSAVTKLFPEGLSKPFRRNCLSLMTLSGAKGGTFNFQQISLLLGQQELEGKRVPRMVSGKTLPCFPAWDSSARAGGFISDRYLSGLRPQEFYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVHYDYTVRDADGSIVQFRYGEDGVDVHQKNYLQEFEALAVNQQLIMSRNPLSQLHDACLSEYIEEDNDLPNEYAKKAQNFLKNDMKVNICGFTHRKDRLNFVKLVKNKYFMSLAQPGEPVGVIAGQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASVSIKTPTMTCPLLKCKSKDDAERLAARLNRITVADLIEKMEVSIVPFTINEHEICSVYKLKIKLYAPELYPPHTEITLQNCYETLEDKFLRELEDTIQTHMSLLSRISGISSVSLSNTTDEAEEDGSGKKSPTGEDDDGDDEDGDNEAAEDLGSEASRSKKAIDEMDYEENTEEAEEEEEKEEDDEEEENEEERRAAETEGSVE

Click here to download the sequence:
Link to NCBI Protein BLAST