Transcript Information: R_Transcript_88777.p1


Annotated TAIR IDAT5G05220.1
Annotated Gene Nameunknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1550273-1550821 | Forward length=182
E-Value7.7E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.8997938498805
Replicate 21.4786127053731
Replicate 32.0970956954224
Condition 2: 8 Hour
Replicate 10.17243566864257
Replicate 20.94482599328953
Replicate 30.38348473141663
Condition 3: 24 Hour
Replicate 11.7784216866531
Replicate 20.77659362290765
Replicate 30.46241629620206


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88777.p1 GENE.R_Transcript_88777~~R_Transcript_88777.p1 ORF type:5prime_partial len:142 (+),score=41.56 R_Transcript_88777:1-426(+)
AAAAAAAAAAAAATGGAACTCACATTATCTCAAGTGAAGACTAACAACAAAATTTTCTCCCTACTTCAAACTCCAGCAGCCAAACAGGCCCTTATTGTTGGAACCCAAAAAATGGGGCCCAATAGAGGGAATCTGAAAATGAGGTGTTCAAAGCCAAAGACTAGTTTGGTGGTGGATTTAGAGAGAGAATTGGAAGATATAGAGAGAGAAGGGAAATGGTGGAGAGGAAAGGAGAATTGTAAAGGAAGAAAGCCATCAATGGAAGAAGAAGAAATGGTGGAATTACTGGAGTGTTTGGAAAGAGAAGCAATCATGGGAGAAGATGAAGGAAAAGAACCAACTGATTATAATAGAAGGGCTCAGATTTTTGACAAGAGCTCCAAGGTTTTTCAAGCCCTCAAGAAAGCCAAACAAACACAGCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88777.p1 GENE.R_Transcript_88777~~R_Transcript_88777.p1 ORF type:5prime_partial len:142 (+),score=41.56 R_Transcript_88777:1-426(+)
KKKKMELTLSQVKTNNKIFSLLQTPAAKQALIVGTQKMGPNRGNLKMRCSKPKTSLVVDLERELEDIEREGKWWRGKENCKGRKPSMEEEEMVELLECLEREAIMGEDEGKEPTDYNRRAQIFDKSSKVFQALKKAKQTQP*

Click here to download the sequence:
Link to NCBI Protein BLAST