Transcript Information: R_Transcript_88778.p1


Annotated TAIR IDAT5G05220.1
Annotated Gene Nameunknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1550273-1550821 | Forward length=182
E-Value6.9E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.089729012222
Replicate 21.096821663538
Replicate 30.85472901478181
Condition 2: 8 Hour
Replicate 18.0401347587969
Replicate 28.343612627308
Replicate 37.7212075027019
Condition 3: 24 Hour
Replicate 112.84951897073
Replicate 210.04008053974
Replicate 38.6570772269072


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88778.p1 GENE.R_Transcript_88778~~R_Transcript_88778.p1 ORF type:5prime_partial len:134 (+),score=36.46 R_Transcript_88778:1-402(+)
AAAAAAAAAAAAATGGAACTCACATTATCTCAAGTGAAGACTAACAACAACAAAATTTTCTCCCTACTTCAAACTCCAGCAGCCAAACAGGCCCTTATTGTTGGAACCCAAAAAATGGGGCCCAATAGAGGGAATCTGAAAATGAGGTGTTCAAAGCCAAAGACTAGTTTGGTGGTGGATTTAGAGAGAGAATTGGAAGATATAGAGAGAGAAGGGAAATGGTGGAGAGGAAGAAAGTCATCAGGAGGAATGGTGGAATTACTGGAGTGTTTGGAAAGAGAAGCAATCATGGGAGAAGATGAAGGAAAAGAACCAACTGATTATAATAGAAGGGCTCAGATTTTTGACAAGAGCTCCAAGGTTTTTCAAGCCCTCAAGAAAGCCAAACAAACACAGCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88778.p1 GENE.R_Transcript_88778~~R_Transcript_88778.p1 ORF type:5prime_partial len:134 (+),score=36.46 R_Transcript_88778:1-402(+)
KKKKMELTLSQVKTNNNKIFSLLQTPAAKQALIVGTQKMGPNRGNLKMRCSKPKTSLVVDLERELEDIEREGKWWRGRKSSGGMVELLECLEREAIMGEDEGKEPTDYNRRAQIFDKSSKVFQALKKAKQTQP*

Click here to download the sequence:
Link to NCBI Protein BLAST